myRT

myRT report for GCA_003292295.1_ASM329229v1

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Seq: NRTK01000072.1 Escherichia coli strain 3844 NODE_18_length_80432_cov_75.9035, whole genome shotgun sequence (80432 bp)
Overview 1 RT 1: 28864-32746 bp Neighborhood of RT #1 [28864, 32751] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 28864-29580 bp Feature: domain Description: rph Location: 28867-29575 bp Feature: domain Description: rph Location: 28867-29575 bp Feature: gene Location: 29631-30287 bp Feature: domain Description: pyrE Location: 29649-30282 bp Feature: domain Description: pyrE Location: 29649-30282 bp Feature: gene Location: 30585-31544 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30720-31269 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30720-31 269 bp Feature: gene Location: 31590-32186 bp Feature: domain Description: slmA Location: 31596-32172 bp Feature: domain Description: slmA Location: 31 596-321 72 bp Feature: gene Location: 32293-32751 bp Feature: domain Description: dut Location: 32299-32746 bp Feature: domain Description: dut Location: 32299-32746 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: NRTK01000078.1 Escherichia coli strain 3844 NODE_61_length_6017_cov_15.5707, whole genome shotgun sequence (6017 bp)
Overview 1 RT 1: 319-5838 bp Neighborhood of RT #1 [319, 5885] Tnp_22_trimer Transposase_22 Tnp_22_dsRBD L1-EN RVT-UNC DUF1725 Feature: gene Location: 319-474 bp Feature: gene Location: 1101-1994 bp Feature: domain Description: Tnp_22_trimer Location: 1308-1434 bp Feature: domain Description: Tnp_2 2 _trimer Location: 1308-1434 bp Feature: domain Description: Transposase_22 Location: 1443-1734 bp Feature: domain Description: Transposase_2 2 Location: 1443-1734 bp Feature: domain Description: Tnp_22_dsRBD Location: 1743-1935 bp Feature: domain Description: Tnp_2 2 _dsRBD Location: 1743-1935 bp Feature: gene Location: 2058-5885 bp Feature: domain Description: L1-EN Location: 2088-2769 bp Feature: domain Description: L1-EN Location: 2 088-2 769 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3642-4299 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3642 -42 99 bp Feature: domain Description: DUF1725 Location: 5784-5838 bp Feature: domain Description: DUF172 5 Location: 5784-5838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tnp_22_trimer (pfam17489), Transposase_22 (pfam02994), Tnp_22_dsRBD (pfam17490), L1-EN (cd09076), RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC), DUF1725 (pfam08333)