myRT

myRT report for GCA_003292435.1_ASM329243v1

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Seq: NRTR01000077.1 Escherichia coli strain A385 NODE_19_length_97709_cov_60.0247, whole genome shotgun sequence (97709 bp)
Overview 1 RT 1: 12677-17387 bp Neighborhood of RT #1 [12677, 18277] Q RVT-AbiP2 Phage_GPA Feature: gene Location: 12677-13711 bp Feature: domain Description: Q Location: 12680-13703 bp Feature: domain Description: Q Location: 1 2680-1 3703 bp Feature: gene Location: 13766-13912 bp Feature: gene Location: 14107-15651 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 14524-14977 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 4524-1 4977 bp Feature: gene Location: 15817-16077 bp Feature: gene Location: 16139-18277 bp Feature: domain Description: Phage_GPA Location: 16400-17387 bp Feature: domain Description: Phage_GPA Location: 1 6400-1 7387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-AbiP2, Phage_GPA (pfam05840)

Seq: NRTR01000083.1 Escherichia coli strain A385 NODE_46_length_16196_cov_57.8487, whole genome shotgun sequence (16196 bp)
Overview 1 RT 1: 9845-13827 bp Neighborhood of RT #1 [9845, 13853] Asparaginase_2 RVT-GII DcuC Feature: gene Location: 9845-10876 bp Feature: domain Description: Asparaginase_2 Location: 9935-10868 bp Feature: domain Description: Asparaginase_2 Location: 9935-10868 bp Feature: gene Location: 11203-11352 bp Feature: gene Location: 11400-11846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11706-11808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11706-11808 bp Feature: gene Location: 12068-12439 bp Feature: gene Location: 12492-13853 bp Feature: domain Description: DcuC Location: 12495-13827 bp Feature: domain Description: DcuC Location: 12 495-1382 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII, DcuC (TIGR00771)

Seq: NRTR01000009.1 Escherichia coli strain A385 NODE_53_length_11373_cov_69.5914, whole genome shotgun sequence (11373 bp)
Overview 1 RT 1: 390-4024 bp Neighborhood of RT #1 [390, 4050] RVT-GII PRK10276 Feature: gene Location: 390-746 bp Feature: gene Location: 896-1513 bp Feature: gene Location: 1727-3214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2132-2822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 213 2-2822 bp Feature: gene Location: 3239-3613 bp Feature: gene Location: 3616-4050 bp Feature: domain Description: PRK10276 Location: 3664-4024 bp Feature: domain Description: PRK10276 Location: 3 664-4024 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)