myRT

myRT report for GCA_003292935.1_ASM329293v1

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Seq: NRUV01000024.1 Escherichia coli strain 3180 NODE_37_length_48863_cov_77.0583, whole genome shotgun sequence (48863 bp)
Overview 1 RT 1: 46165-48476 bp Neighborhood of RT #1 [46165, 48643] LacI PBP1_GntR RVT-GII GIIM Feature: gene Location: 46165-47196 bp Feature: domain Description: LacI Location: 46207-46342 bp Feature: domain Description: LacI Location: 46207-46342 bp Feature: domain Description: PBP1_GntR Location: 46381-47191 bp Feature: domain Description: PBP1 _GntR Location: 46381 -471 91 bp Feature: gene Location: 47327-47545 bp Feature: gene Location: 47723-48643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47792-48203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47792-48203 bp Feature: domain Description: GIIM Note: maturase Location: 48251-48476 bp Feature: domain Description: GIIM Note: maturase Location: 48251 -48476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LacI (pfam00356), PBP1_GntR (cd01575), RVT-GII, GIIM (pfam08388)

Seq: NRUV01000010.1 Escherichia coli strain 3180 NODE_46_length_40739_cov_69.8602, whole genome shotgun sequence (40739 bp)
Overview 1 RT 1: 36717-40345 bp Neighborhood of RT #1 [36717, 40345] DUF932 RVT-Retrons Feature: gene Location: 36717-37145 bp Feature: gene Location: 37220-38041 bp Feature: domain Description: DUF932 Location: 37334-38006 bp Feature: domain Description: DUF932 Location: 37334-38006 bp Feature: gene Location: 38292-40016 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38430-39054 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38430-39054 bp Feature: gene Location: 40175-40345 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-Retrons