myRT

myRT report for GCA_003293565.1_ASM329356v1

Download annotations/find similar RTs

Seq: NRVV01000008.1 Escherichia coli strain A165 NODE_1_length_272722_cov_84.9134, whole genome shotgun sequence (272722 bp)
Overview 1 RT 1: 6100-11859 bp 2 RT 2: 37266-41866 bp Neighborhood of RT #1 [6100, 11924] HsdM PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [37266, 42129] RVT-GII Inovirus_Gp2 DUF3987 Feature: gene Location: 6100-8523 bp Feature: domain Description: HsdM Location: 6121-8065 bp Feature: domain Description: HsdM Location: 61 21 -8065 bp Feature: gene Location: 8782-9135 bp Feature: domain Description: PHA02517 Location: 8785-9130 bp Feature: domain Description: PHA0251 7 Location: 8785-91 30 bp Feature: gene Location: 9330-10676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9426-10158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9426-1 01 58 bp Feature: domain Description: GIIM Note: maturase Location: 10233-10431 bp Feature: domain Description: GIIM Note: maturase Location: 1 0233-1 0431 bp Feature: gene Location: 10807-11232 bp Feature: gene Location: 11445-11924 bp Feature: domain Description: PHA02517 Location: 11505-11859 bp Feature: domain Description: PHA0251 7 Location: 1 1 505-1 1 859 bp Feature: gene Location: 37266-37439 bp Feature: gene Location: 37473-37781 bp Feature: gene Location: 37768-38931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37882-38569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37882-38569 bp Feature: gene Location: 39257-39820 bp Feature: domain Description: Inovirus_Gp2 Location: 39314-39755 bp Feature: domain Description: Inovirus_Gp2 Location: 3931 4-39755 bp Feature: gene Location: 40678-42129 bp Feature: domain Description: DUF3987 Location: 40789-41866 bp Feature: domain Description: DUF3987 Location: 40789-41 866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), HsdM (COG0286), RVT-GII, GIIM (pfam08388), Inovirus_Gp2 (pfam11726), DUF3987 (pfam13148)

Seq: NRVV01000146.1 Escherichia coli strain A165 NODE_40_length_32514_cov_123.982, whole genome shotgun sequence (32514 bp)
Overview 1 RT 1: 48-3204 bp Neighborhood of RT #1 [48, 3221] DDE_Tnp_IS1 InsA RVT-GII PRK10276 Feature: gene Location: 48-551 bp Feature: domain Description: DDE_Tnp_IS1 Location: 159-549 bp Feature: domain Description: DDE_Tnp_IS1 Location: 159-549 bp Feature: gene Location: 470-745 bp Feature: domain Description: InsA Location: 473-737 bp Feature: domain Description: InsA Location: 473-737 bp Feature: gene Location: 897-1907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 903-1515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 903-1515 bp Feature: gene Location: 1882-2484 bp Feature: gene Location: 2538-3221 bp Feature: domain Description: PRK10276 Location: 2841-3204 bp Feature: domain Description: PRK102 76 Location: 2 841-32 04 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), InsA (COG3677), DDE_Tnp_IS1 (pfam03400), RVT-GII