myRT

myRT report for GCA_003293845.1_ASM329384v1

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Seq: QLST01000014.1 Flavobacterium tibetense strain YH5 YH5_scaffold14, whole genome shotgun sequence (74779 bp)
Overview 1 RT 1: 2-2304 bp Neighborhood of RT #1 [2, 2304] RVT-GII Feature: gene Location: 2-838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197-812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 97-81 2 bp Feature: gene Location: 1542-1973 bp Feature: gene Location: 2125-2304 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QLST01000015.1 Flavobacterium tibetense strain YH5 YH5_scaffold15, whole genome shotgun sequence (53568 bp)
Overview 1 RT 1: 2-2284 bp Neighborhood of RT #1 [2, 2284] RVT-GII ParD_antitoxin Feature: gene Location: 2-838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197-812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197-812 bp Feature: gene Location: 1610-1858 bp Feature: domain Description: ParD_antitoxin Location: 1613-1847 bp Feature: domain Description: ParD_antitoxin Location: 1613-1847 bp Feature: gene Location: 2105-2284 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParD_antitoxin (pfam03693), RVT-GII

Seq: QLST01000019.1 Flavobacterium tibetense strain YH5 YH5_scaffold19, whole genome shotgun sequence (43156 bp)
Overview 1 RT 1: 2-2805 bp Neighborhood of RT #1 [2, 2805] RVT-GII SRAP Feature: gene Location: 2-838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197-812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197-812 bp Feature: gene Location: 1555-2199 bp Feature: domain Description: SRAP Location: 1558-2113 bp Feature: domain Description: SRAP Location: 1558-2113 bp Feature: gene Location: 2641-2805 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SRAP (pfam02586), RVT-GII

Seq: QLST01000021.1 Flavobacterium tibetense strain YH5 YH5_scaffold21, whole genome shotgun sequence (29360 bp)
Overview 1 RT 1: 2-3679 bp Neighborhood of RT #1 [2, 3679] RVT-GII PRK06327 Feature: gene Location: 2-838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197-812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197-812 bp Feature: gene Location: 1641-3044 bp Feature: domain Description: PRK06327 Location: 1647-3039 bp Feature: domain Description: PRK06327 Location: 164 7-3039 bp Feature: gene Location: 3218-3679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06327 (dihydrolipoamide dehydrogenase; Validated), RVT-GII

Seq: QLST01000031.1 Flavobacterium tibetense strain YH5 YH5_scaffold31, whole genome shotgun sequence (4458 bp)
Overview 1 RT 1: 935-4431 bp Neighborhood of RT #1 [935, 4457] Sortilin-Vps10 RVT-GII Feature: gene Location: 935-3040 bp Feature: domain Description: Sortilin-Vps10 Location: 1376-1733 bp Feature: domain Description: Sortilin-Vps10 Location: 1376-1733 bp Feature: gene Location: 3216-3380 bp Feature: gene Location: 3621-4457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3816-4431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3816-4431 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Sortilin-Vps10 (pfam15902)

Seq: QLST01000038.1 Flavobacterium tibetense strain YH5 YH5_scaffold38, whole genome shotgun sequence (1926 bp)
Overview 1 RT 1: 161-1661 bp Neighborhood of RT #1 [161, 1861] RVT-GII GIIM Feature: gene Location: 161-325 bp Feature: gene Location: 566-1861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 761-1376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76 1-1376 bp Feature: domain Description: GIIM Note: maturase Location: 1448-1661 bp Feature: domain Description: GIIM Note: maturase Location: 1448-16 6 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QLST01000039.1 Flavobacterium tibetense strain YH5 YH5_scaffold39, whole genome shotgun sequence (1924 bp)
Overview 1 RT 1: 161-1661 bp Neighborhood of RT #1 [161, 1861] RVT-GII GIIM Feature: gene Location: 161-325 bp Feature: gene Location: 566-1861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 761-1376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 61-137 6 bp Feature: domain Description: GIIM Note: maturase Location: 1448-1661 bp Feature: domain Description: GIIM Note: maturase Location: 1448-1661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QLST01000005.1 Flavobacterium tibetense strain YH5 YH5_scaffold5, whole genome shotgun sequence (185038 bp)
Overview 1 RT 1: 182130-185011 bp Neighborhood of RT #1 [182130, 185037] Orn_aminotrans RVT-GII Feature: gene Location: 182130-183410 bp Feature: domain Description: Orn_aminotrans Location: 182160-183393 bp Feature: domain Description: Orn_aminotrans Location: 18 2160-18 3393 bp Feature: gene Location: 183512-183898 bp Feature: gene Location: 184201-185037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184396-185011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18 4396-18 5011 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Orn_aminotrans (TIGR01885), RVT-GII