myRT

myRT report for GCA_003294055.1_ASM329405v1

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Seq: QMFZ01000018.1 Burkholderia reimsis strain BE51 NODE_18_length_157936_cov_42.2527, whole genome shotgun sequence (157936 bp)
Overview 1 RT 1: 134171-138678 bp Neighborhood of RT #1 [134171, 138678] SLATT_5 RVT-UG17 Feature: gene Location: 134171-134908 bp Feature: gene Location: 134961-135485 bp Feature: domain Description: SLATT_5 Location: 134964-135444 bp Feature: domain Description: SLATT_5 Location: 1 34964-1 35444 bp Feature: gene Location: 135806-137206 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 136040-136652 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 36040-1 36652 bp Feature: gene Location: 137563-138138 bp Feature: gene Location: 138211-138678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17

Seq: QMFZ01000001.1 Burkholderia reimsis strain BE51 NODE_1_length_650961_cov_38.6705, whole genome shotgun sequence (650961 bp)
Overview 1 RT 1: 46725-52010 bp Neighborhood of RT #1 [46725, 52033] FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 46725-46997 bp Feature: gene Location: 47623-48195 bp Feature: domain Description: FIN Location: 47800-48157 bp Feature: domain Description: FIN Location: 47800-48157 bp Feature: gene Location: 48338-49798 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48914-49550 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48914-49550 bp Feature: gene Location: 50159-50488 bp Feature: domain Description: Histone_HNS Location: 50180-50417 bp Feature: domain Description: Histone_HNS Location: 50180-50417 bp Feature: gene Location: 50798-52033 bp Feature: domain Description: MFS_MucK Location: 50876-52010 bp Feature: domain Description: MFS_MucK Location: 50876-52 010 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)

Seq: QMFZ01000026.1 Burkholderia reimsis strain BE51 NODE_26_length_136720_cov_42.7103, whole genome shotgun sequence (136720 bp)
Overview 1 RT 1: 103414-111519 bp Neighborhood of RT #1 [103414, 111519] QueC RbsK RCL RVT-Retrons DUF3732 Feature: gene Location: 103414-104010 bp Feature: domain Description: QueC Location: 103417-103999 bp Feature: domain Description: QueC Location: 103 417-103 999 bp Feature: gene Location: 104007-105206 bp Feature: domain Description: RbsK Location: 104436-104769 bp Feature: domain Description: RbsK Location: 10443 6-104769 bp Feature: domain Description: RCL Location: 104838-105126 bp Feature: domain Description: RCL Location: 10483 8-105126 bp Feature: gene Location: 105914-107344 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 105920-106376 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 105920-1063 76 bp Feature: gene Location: 107834-109945 bp Feature: domain Description: DUF3732 Location: 109337-109889 bp Feature: domain Description: DUF3 73 2 Location: 1093 3 7-109889 bp Feature: gene Location: 110314-111519 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT QueC (pfam06508), RbsK (COG0524), RCL (COG3613), RVT-Retrons, DUF3732 (pfam12532)

Seq: QMFZ01000074.1 Burkholderia reimsis strain BE51 NODE_74_length_20268_cov_41.033, whole genome shotgun sequence (20268 bp)
Overview 1 RT 1: 2531-9415 bp Neighborhood of RT #1 [2531, 9420] Imm21 DUF4265 RVT-Retrons Trypsin_2 PRK09692 PRK13565 Feature: gene Location: 2531-3028 bp Feature: domain Description: Imm21 Location: 2555-2993 bp Feature: domain Description: Imm21 Location: 2555-2993 bp Feature: gene Location: 3531-4016 bp Feature: domain Description: DUF4265 Location: 3603-3942 bp Feature: domain Description: DUF4 265 Location: 3603-394 2 bp Feature: gene Location: 4221-6215 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4368-4980 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4 368-4 980 bp Feature: domain Description: Trypsin_2 Location: 5451-5916 bp Feature: domain Description: Trypsin_2 Location: 54 51-5916 bp Feature: gene Location: 6518-7762 bp Feature: domain Description: PRK09692 Location: 6524-7742 bp Feature: domain Description: PRK09692 Location: 6524 -774 2 bp Feature: gene Location: 7927-9420 bp Feature: domain Description: PRK13565 Location: 7930-9415 bp Feature: domain Description: PRK13565 Location: 7930-94 15 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Imm21 (pfam15589), DUF4265 (pfam14085), RVT-Retrons, Trypsin_2 (pfam13365), PRK09692 (Integrase; provisional), PRK13565 (anthranilate synthase component I; Provisional)