myRT

myRT report for GCA_003297305.1_ASM329730v1

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Seq: BGPU01000026.1 Escherichia coli TUM18533 DNA, sequence26, whole genome shotgun sequence (51389 bp)
Overview 1 RT 1: 13272-17563 bp Neighborhood of RT #1 [13272, 17563] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 13272-14534 bp Feature: domain Description: YesM Location: 13785-14526 bp Feature: domain Description: YesM Location: 1 3785-1 4526 bp Feature: gene Location: 14564-14734 bp Feature: gene Location: 15084-15605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15090-15372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5090-1 5372 bp Feature: domain Description: GIIM Note: maturase Location: 15420-15600 bp Feature: domain Description: GIIM Note: maturase Location: 1 5420-1 5600 bp Feature: gene Location: 15633-16172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15963-16041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5963-1 6041 bp Feature: gene Location: 16203-16400 bp Feature: gene Location: 16658-17563 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: BGPU01000046.1 Escherichia coli TUM18533 DNA, sequence46, whole genome shotgun sequence (15303 bp)
Overview 1 RT 1: 3-1077 bp Neighborhood of RT #1 [3, 1085] RVT-GII PRK10173 PRK10173 Feature: gene Location: 3-302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 -144 bp Feature: gene Location: 341-652 bp Feature: domain Description: PRK10173 Location: 344-563 bp Feature: domain Description: PRK10173 Location: 344-563 bp Feature: gene Location: 636-1085 bp Feature: domain Description: PRK10173 Location: 639-1077 bp Feature: domain Description: PRK10173 Location: 639-1077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: BGPU01000060.1 Escherichia coli TUM18533 DNA, sequence60, whole genome shotgun sequence (4048 bp)
Overview 1 RT 1: 3-2188 bp Neighborhood of RT #1 [3, 2922] RVT-GII rve Feature: gene Location: 3-329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-3 3 0 bp Feature: gene Location: 960-1178 bp Feature: gene Location: 1423-2922 bp Feature: domain Description: rve Location: 1795-2188 bp Feature: domain Description: rve Location: 1795-2188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, rve (pfam00665)

Seq: BGPU01000065.1 Escherichia coli TUM18533 DNA, sequence65, whole genome shotgun sequence (3093 bp)
Overview 1 RT 1: 3-2190 bp Neighborhood of RT #1 [3, 2228] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 3-1322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-804 bp Feature: domain Description: GIIM Note: maturase Location: 879-1077 bp Feature: domain Description: GIIM Note: maturase Location: 879-1077 bp Feature: gene Location: 1499-1795 bp Feature: domain Description: PHA02517 Location: 1502-1751 bp Feature: domain Description: PHA02517 Location: 1502-1751 bp Feature: gene Location: 1824-2228 bp Feature: domain Description: InsE Location: 1854-2190 bp Feature: domain Description: InsE Location: 1854 -2190 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)