myRT

myRT report for GCA_003297405.1_ASM329740v1

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Seq: BGPX01000003.1 Escherichia coli TUM18536 DNA, sequence003, whole genome shotgun sequence (432370 bp)
Overview 1 RT 1: 14269-19902 bp Neighborhood of RT #1 [14269, 19955] PRK13889 RVT-UG16 DUF4755 Feature: gene Location: 14269-14634 bp Feature: gene Location: 15282-16775 bp Feature: domain Description: PRK13889 Location: 15285-15885 bp Feature: domain Description: PRK1 3889 Location: 1 5285-1 5885 bp Feature: gene Location: 16913-18397 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 17276-17684 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 1 7276-1 7684 bp Feature: gene Location: 18526-19059 bp Feature: gene Location: 19467-19955 bp Feature: domain Description: DUF4755 Location: 19599-19902 bp Feature: domain Description: DUF4755 Location: 1 9599-1 9902 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-UG16, DUF4755 (pfam15947)

Seq: BGPX01000008.1 Escherichia coli TUM18536 DNA, sequence008, whole genome shotgun sequence (204512 bp)
Overview 1 RT 1: 99744-105653 bp Neighborhood of RT #1 [99744, 105653] DUF4062 RVT-AbiP2 HTH_36 Feature: gene Location: 99744-100325 bp Feature: gene Location: 100363-101700 bp Feature: domain Description: DUF4062 Location: 100396-100639 bp Feature: domain Description: DUF4062 Location: 100396-100639 bp Feature: gene Location: 102101-103600 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 102533-102989 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 102 533-102 989 bp Feature: gene Location: 103808-104317 bp Feature: domain Description: HTH_36 Location: 103994-104150 bp Feature: domain Description: HTH_36 Location: 103994-104150 bp Feature: gene Location: 105228-105653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4062 (pfam13271), RVT-AbiP2, HTH_36 (pfam13730)

Seq: BGPX01000027.1 Escherichia coli TUM18536 DNA, sequence027, whole genome shotgun sequence (28152 bp)
Overview 1 RT 1: 27068-27989 bp Neighborhood of RT #1 [27068, 28150] PRK10173 PRK10173 RVT-GII Feature: gene Location: 27068-27517 bp Feature: domain Description: PRK10173 Location: 27071-27509 bp Feature: domain Description: PRK10173 Location: 27071-27509 bp Feature: gene Location: 27501-27812 bp Feature: domain Description: PRK10173 Location: 27504-27723 bp Feature: domain Description: PRK10173 Location: 27504-27723 bp Feature: gene Location: 27851-28150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27920-27989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27920-27989 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII

Seq: BGPX01000029.1 Escherichia coli TUM18536 DNA, sequence029, whole genome shotgun sequence (25329 bp)
Overview 1 RT 1: 23102-25082 bp Neighborhood of RT #1 [23102, 25327] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 23102-23506 bp Feature: domain Description: InsE Location: 23132-23468 bp Feature: domain Description: InsE Location: 23132-234 68 bp Feature: gene Location: 23535-23891 bp Feature: domain Description: PHA02517 Location: 23538-23847 bp Feature: domain Description: PHA02517 Location: 23538-2384 7 bp Feature: gene Location: 24008-25327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24077-24809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24 077-24 809 bp Feature: domain Description: GIIM Note: maturase Location: 24884-25082 bp Feature: domain Description: GIIM Note: maturase Location: 24 884 -25082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: BGPX01000071.1 Escherichia coli TUM18536 DNA, sequence071, whole genome shotgun sequence (1329 bp)
Overview 1 RT 1: 3-1263 bp Neighborhood of RT #1 [3, 1328] RVT-GII PHA02517 Feature: gene Location: 3-329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: gene Location: 921-1328 bp Feature: domain Description: PHA02517 Location: 924-1263 bp Feature: domain Description: PHA025 17 Location: 924-1263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)