myRT

myRT report for GCA_003297645.1_ASM329764v1

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Seq: BGQE01000029.1 Escherichia coli TUM18543 DNA, sequence029, whole genome shotgun sequence (55217 bp)
Overview 1 RT 1: 26580-32611 bp Neighborhood of RT #1 [26580, 32611] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 26580-27500 bp Feature: domain Description: AbiEii Location: 26622-27363 bp Feature: domain Description: AbiEii Location: 26622-27363 bp Feature: gene Location: 27487-28290 bp Feature: domain Description: AbiEi_3_N Location: 27520-27781 bp Feature: domain Description: AbiEi_3_N Location: 27520-27781 bp Feature: domain Description: AbiEi_3 Location: 27793-28249 bp Feature: domain Description: AbiEi_3 Location: 27793-28249 bp Feature: gene Location: 28585-31794 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 29113-29602 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 291 1 3-29602 bp Feature: domain Description: nitrilase Location: 31108-31705 bp Feature: domain Description: nitrilase Location: 31 1 08-31 705 bp Feature: gene Location: 31955-32095 bp Feature: domain Description: Phage_ASH Location: 31982-32075 bp Feature: domain Description: Phage_ASH Location: 31 982-32075 bp Feature: gene Location: 32141-32611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: BGQE01000085.1 Escherichia coli TUM18543 DNA, sequence085, whole genome shotgun sequence (12067 bp)
Overview 1 RT 1: 10142-12027 bp Neighborhood of RT #1 [10142, 12065] Asparaginase_2 RVT-GII Feature: gene Location: 10142-11173 bp Feature: domain Description: Asparaginase_2 Location: 10232-11165 bp Feature: domain Description: Asparaginase_2 Location: 102 32 -11165 bp Feature: gene Location: 11500-11649 bp Feature: gene Location: 11697-12065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11925-12027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1192 5-12 02 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII

Seq: BGQE01000097.1 Escherichia coli TUM18543 DNA, sequence097, whole genome shotgun sequence (8508 bp)
Overview 1 RT 1: 3-2817 bp Neighborhood of RT #1 [3, 2825] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 3-464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 255-333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 255-3 3 3 bp Feature: gene Location: 492-1013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 498-780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 498-780 bp Feature: domain Description: GIIM Note: maturase Location: 828-1008 bp Feature: domain Description: GIIM Note: maturase Location: 828-1008 bp Feature: gene Location: 1335-1523 bp Feature: gene Location: 1563-2825 bp Feature: domain Description: YesM Location: 2076-2817 bp Feature: domain Description: YesM Location: 2076-2817 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: BGQE01000134.1 Escherichia coli TUM18543 DNA, sequence134, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)