myRT

myRT report for GCA_003297845.1_ASM329784v1

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Seq: BGQI01000010.1 Escherichia coli TUM18547 DNA, sequence010, whole genome shotgun sequence (166208 bp)
Overview 1 RT 1: 137571-143602 bp Neighborhood of RT #1 [137571, 143602] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 137571-138491 bp Feature: domain Description: AbiEii Location: 137613-138354 bp Feature: domain Description: AbiEii Location: 1 3761 3-1 38354 bp Feature: gene Location: 138478-139281 bp Feature: domain Description: AbiEi_3_N Location: 138511-138772 bp Feature: domain Description: AbiEi_3_N Location: 1 3851 1 -1 38772 bp Feature: domain Description: AbiEi_3 Location: 138784-139240 bp Feature: domain Description: AbiEi_3 Location: 1 38784-1 39240 bp Feature: gene Location: 139576-142785 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 140104-140593 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 401 04-1 40593 bp Feature: domain Description: nitrilase Location: 142099-142696 bp Feature: domain Description: nitrilase Location: 1 42099-1 42696 bp Feature: gene Location: 142946-143086 bp Feature: domain Description: Phage_ASH Location: 142973-143066 bp Feature: domain Description: Phage_ASH Location: 1 42973-1 43066 bp Feature: gene Location: 143132-143602 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: BGQI01000043.1 Escherichia coli TUM18547 DNA, sequence043, whole genome shotgun sequence (33240 bp)
Overview 1 RT 1: 5107-8172 bp Neighborhood of RT #1 [5107, 8172] RVT-GII GIIM RVT-GII Feature: gene Location: 5107-5277 bp Feature: gene Location: 5415-5594 bp Feature: gene Location: 5693-6214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5699-5981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5699-5981 bp Feature: domain Description: GIIM Note: maturase Location: 6029-6209 bp Feature: domain Description: GIIM Note: maturase Location: 602 9-62 09 bp Feature: gene Location: 6242-6781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6572-6650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6572 -6650 bp Feature: gene Location: 6812-7009 bp Feature: gene Location: 7267-8172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BGQI01000105.1 Escherichia coli TUM18547 DNA, sequence105, whole genome shotgun sequence (1884 bp)
Overview 1 RT 1: 259-1537 bp Neighborhood of RT #1 [259, 1782] RVT-GII GIIM Feature: gene Location: 259-1782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 532-1264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53 2-1264 bp Feature: domain Description: GIIM Note: maturase Location: 1339-1537 bp Feature: domain Description: GIIM Note: maturase Location: 13 3 9-153 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)