myRT

myRT report for GCA_003298795.1_ASM329879v1

Download annotations/find similar RTs

Seq: QNTU01000020.1 Halomonas sulfidaeris strain SST4 contig_20, whole genome shotgun sequence (33614 bp)
Overview 1 RT 1: 12157-16535 bp Neighborhood of RT #1 [12157, 17053] Yae1_N RVT-GII Crp GRX_GRXb_1_3_like Feature: gene Location: 12157-12765 bp Feature: gene Location: 12900-13688 bp Feature: domain Description: Yae1_N Location: 13359-13437 bp Feature: domain Description: Yae1 _N Location: 1 3359-1 3437 bp Feature: gene Location: 13917-14876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14187-14799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 87-1 4799 bp Feature: gene Location: 14945-15730 bp Feature: domain Description: Crp Location: 15053-15659 bp Feature: domain Description: Crp Location: 1 5053-1 5659 bp Feature: gene Location: 16316-17053 bp Feature: domain Description: GRX_GRXb_1_3_like Location: 16358-16535 bp Feature: domain Description: GRX_GRXb_1 _3_like Location: 1 6358-1 6535 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Yae1_N (pfam09811), RVT-GII, Crp (pfam00325), GRX_GRXb_1_3_like (cd03418)

Seq: QNTU01000025.1 Halomonas sulfidaeris strain SST4 contig_25, whole genome shotgun sequence (23580 bp)
Overview 1 RT 1: 16184-20714 bp Neighborhood of RT #1 [16184, 23440] HsdM RMtype1_S_EcoEI-TRD1-CR1_like RMtype1_S_EcoEI-TRD1-CR1_like RVT-UG1 Feature: gene Location: 16184-17722 bp Feature: domain Description: HsdM Location: 16241-17690 bp Feature: domain Description: HsdM Location: 162 41-17690 bp Feature: gene Location: 17719-19485 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 18100-18592 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 18100-18592 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 19075-19453 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 19075-19453 bp Feature: gene Location: 19496-23440 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 20174-20714 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 2 0174-2 0714 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RMtype1_S_EcoEI-TRD1-CR1_like (cd17260), RVT-UG1