myRT

myRT report for GCA_003299165.1_ASM329916v1

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Seq: BGRN01000039.1 Escherichia coli TUM18578 DNA, sequence039, whole genome shotgun sequence (13324 bp)
Overview 1 RT 1: 12240-13164 bp Neighborhood of RT #1 [12240, 13322] PRK10173 PRK10173 RVT-GII Feature: gene Location: 12240-12689 bp Feature: domain Description: PRK10173 Location: 12243-12681 bp Feature: domain Description: PRK1 01 73 Location: 1 2243-1 2681 bp Feature: gene Location: 12673-12984 bp Feature: domain Description: PRK10173 Location: 12676-12895 bp Feature: domain Description: PRK1 01 73 Location: 1 2676-1 2895 bp Feature: gene Location: 13023-13322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13092-13164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3092-1 31 64 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII

Seq: BGRN01000057.1 Escherichia coli TUM18578 DNA, sequence057, whole genome shotgun sequence (4048 bp)
Overview 1 RT 1: 3-2188 bp Neighborhood of RT #1 [3, 2922] RVT-GII rve Feature: gene Location: 3-329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 76-330 bp Feature: gene Location: 960-1178 bp Feature: gene Location: 1423-2922 bp Feature: domain Description: rve Location: 1795-2188 bp Feature: domain Description: rve Location: 1795-2 188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve (pfam00665), RVT-GII

Seq: BGRN01000059.1 Escherichia coli TUM18578 DNA, sequence059, whole genome shotgun sequence (3776 bp)
Overview 1 RT 1: 1549-3529 bp Neighborhood of RT #1 [1549, 3774] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 1549-1953 bp Feature: domain Description: InsE Location: 1579-1915 bp Feature: domain Description: InsE Location: 1579-1915 bp Feature: gene Location: 1982-2338 bp Feature: domain Description: PHA02517 Location: 1985-2294 bp Feature: domain Description: PHA02517 Location: 1985-2294 bp Feature: gene Location: 2455-3774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2524-3256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2524-3 256 bp Feature: domain Description: GIIM Note: maturase Location: 3331-3529 bp Feature: domain Description: GIIM Note: maturase Location: 3 3 3 1-3 529 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)