myRT

myRT report for GCA_003299405.1_ASM329940v1

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Seq: BGRU01000018.1 Escherichia coli TUM18585 DNA, sequence018, whole genome shotgun sequence (97807 bp)
Overview 1 RT 1: 9870-13752 bp Neighborhood of RT #1 [9870, 13757] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 9870-10328 bp Feature: domain Description: dut Location: 9876-10323 bp Feature: domain Description: dut Location: 9876-1 0323 bp Feature: gene Location: 10435-11031 bp Feature: domain Description: slmA Location: 10441-11017 bp Feature: domain Description: slmA Location: 1 0441 -1 1 01 7 bp Feature: gene Location: 11077-12036 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11212-11761 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 21 2-1 1 761 bp Feature: gene Location: 12334-12990 bp Feature: domain Description: pyrE Location: 12352-12985 bp Feature: domain Description: pyrE Location: 1 2352-1 2985 bp Feature: gene Location: 13041-13757 bp Feature: domain Description: rph Location: 13044-13752 bp Feature: domain Description: rph Location: 1 3044-1 3752 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: BGRU01000050.1 Escherichia coli TUM18585 DNA, sequence050, whole genome shotgun sequence (27167 bp)
Overview 1 RT 1: 25555-27035 bp Neighborhood of RT #1 [25555, 27166] RVT-GII GIIM RVT-GII Feature: gene Location: 25555-25725 bp Feature: gene Location: 25863-26042 bp Feature: gene Location: 26141-26662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26147-26429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6147-2 642 9 bp Feature: domain Description: GIIM Note: maturase Location: 26477-26657 bp Feature: domain Description: GIIM Note: maturase Location: 2 6477-2 6657 bp Feature: gene Location: 26690-27166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26957-27035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6957-2 7035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BGRU01000066.1 Escherichia coli TUM18585 DNA, sequence066, whole genome shotgun sequence (17225 bp)
Overview 1 RT 1: 2-1932 bp Neighborhood of RT #1 [2, 1940] RVT-GII Asparaginase_2 Feature: gene Location: 2-385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245-347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245-3 47 bp Feature: gene Location: 433-582 bp Feature: gene Location: 909-1940 bp Feature: domain Description: Asparaginase_2 Location: 999-1932 bp Feature: domain Description: Asparaginase_2 Location: 999-193 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Asparaginase_2 (pfam01112)