myRT

myRT report for GCA_003300015.1_ASM330001v1

Download annotations/find similar RTs

Seq: BGSK01000001.1 Escherichia coli TUM18601 DNA, sequence01, whole genome shotgun sequence (615960 bp)
Overview 1 RT 1: 525741-532524 bp Neighborhood of RT #1 [525741, 532532] PHA00080 Phage_GPA RVT-Retrons ABC_ATPase Q Feature: gene Location: 525741-525965 bp Feature: domain Description: PHA00080 Location: 525747-525957 bp Feature: domain Description: PHA00080 Location: 525747-525957 bp Feature: gene Location: 526227-528497 bp Feature: domain Description: Phage_GPA Location: 526626-527613 bp Feature: domain Description: Phage_GPA Location: 526626-52761 3 bp Feature: gene Location: 528824-529813 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 528941-529502 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 528941 -529502 bp Feature: gene Location: 529815-531167 bp Feature: domain Description: ABC_ATPase Location: 529875-530598 bp Feature: domain Description: ABC_ATPase Location: 529875-530598 bp Feature: gene Location: 531498-532532 bp Feature: domain Description: Q Location: 531501-532524 bp Feature: domain Description: Q Location: 531 501 -532524 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00080 (DksA-like zinc finger domain containing protein), Phage_GPA (pfam05840), RVT-Retrons, ABC_ATPase (pfam09818), Q (PHA02536)

Seq: BGSK01000007.1 Escherichia coli TUM18601 DNA, sequence07, whole genome shotgun sequence (197936 bp)
Overview 1 RT 1: 84737-88774 bp Neighborhood of RT #1 [84737, 88776] RVT-Retrons COG3943 PRK15011 Feature: gene Location: 84737-84871 bp Feature: gene Location: 84883-85833 bp Feature: gene Location: 85820-86770 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 85919-86510 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 85919-86510 bp Feature: gene Location: 87064-87210 bp Feature: domain Description: COG3943 Location: 87067-87166 bp Feature: domain Description: COG3943 Location: 87067-87166 bp Feature: gene Location: 87592-88776 bp Feature: domain Description: PRK15011 Location: 87601-88774 bp Feature: domain Description: PRK15011 Location: 87601-88774 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG3943 (Uncharacterized conserved protein ), PRK15011 (sugar efflux transporter SetB)