myRT

myRT report for GCA_003300085.1_ASM330008v1

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Seq: BGSM01000040.1 Escherichia coli TUM18603 DNA, sequence040, whole genome shotgun sequence (31330 bp)
Overview 1 RT 1: 24417-30040 bp Neighborhood of RT #1 [24417, 30042] Psu RVT-UG15 PRK09692 PRK11462 Feature: gene Location: 24417-24989 bp Feature: domain Description: Psu Location: 24435-24972 bp Feature: domain Description: Psu Location: 24435-24972 bp Feature: gene Location: 25042-25218 bp Feature: gene Location: 25313-26923 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 25721-26144 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 25721 -261 44 bp Feature: gene Location: 26941-28110 bp Feature: domain Description: PRK09692 Location: 26950-28093 bp Feature: domain Description: PRK09692 Location: 26950-28093 bp Feature: gene Location: 28615-30042 bp Feature: domain Description: PRK11462 Location: 28663-30040 bp Feature: domain Description: PRK1 1 462 Location: 28663-30040 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), RVT-UG15, PRK09692 (Integrase; provisional), PRK11462 (putative transporter; Provisional)

Seq: BGSM01000069.1 Escherichia coli TUM18603 DNA, sequence069, whole genome shotgun sequence (3438 bp)
Overview 1 RT 1: 3-3187 bp Neighborhood of RT #1 [3, 3187] YhhI YhhI YhhI RVT-GII GIIM Feature: gene Location: 3-986 bp Feature: domain Description: YhhI Location: 6-369 bp Feature: domain Description: YhhI Location: 6-369 bp Feature: domain Description: YhhI Location: 426-780 bp Feature: domain Description: YhhI Location: 42 6-780 bp Feature: domain Description: YhhI Location: 798-987 bp Feature: domain Description: YhhI Location: 798-987 bp Feature: gene Location: 1211-1360 bp Feature: gene Location: 1433-2683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1637-2294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1637-2 2 94 bp Feature: domain Description: GIIM Note: maturase Location: 2375-2597 bp Feature: domain Description: GIIM Note: maturase Location: 2 375-2 597 bp Feature: gene Location: 2671-2994 bp Feature: gene Location: 3047-3187 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388)