myRT

myRT report for GCA_003300275.1_ASM330027v1

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Seq: BGSR01000046.1 Escherichia coli TUM18608 DNA, sequence046, whole genome shotgun sequence (11839 bp)
Overview 1 RT 1: 696-4585 bp Neighborhood of RT #1 [696, 4827] RVT-UG1 GerD Feature: gene Location: 696-3167 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1308-1818 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1 308-1 81 8 bp Feature: gene Location: 3269-4384 bp Feature: gene Location: 4393-4827 bp Feature: domain Description: GerD Location: 4471-4585 bp Feature: domain Description: GerD Location: 4471 -4585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG1, GerD (pfam17898)

Seq: BGSR01000047.1 Escherichia coli TUM18608 DNA, sequence047, whole genome shotgun sequence (11776 bp)
Overview 1 RT 1: 3-1077 bp Neighborhood of RT #1 [3, 1085] RVT-GII PRK10173 PRK10173 Feature: gene Location: 3-302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 -141 bp Feature: gene Location: 341-652 bp Feature: domain Description: PRK10173 Location: 344-563 bp Feature: domain Description: PRK10173 Location: 344-563 bp Feature: gene Location: 636-1085 bp Feature: domain Description: PRK10173 Location: 639-1077 bp Feature: domain Description: PRK10173 Location: 639-1077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: BGSR01000051.1 Escherichia coli TUM18608 DNA, sequence051, whole genome shotgun sequence (10481 bp)
Overview 1 RT 1: 1952-4364 bp Neighborhood of RT #1 [1952, 4438] PHA02517 InsE RVT-GII RVT-GII group_II_RT_mat IS285 Feature: gene Location: 1952-2653 bp Feature: domain Description: PHA02517 Location: 1970-2648 bp Feature: domain Description: PHA02517 Location: 1970-2648 bp Feature: gene Location: 2794-3096 bp Feature: domain Description: InsE Location: 2797-3082 bp Feature: domain Description: InsE Location: 2797-3 082 bp Feature: gene Location: 3135-3338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3180-3336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 180-3 3 3 6 bp Feature: gene Location: 3372-3608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3375-3555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 75-3 555 bp Feature: gene Location: 3601-3813 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3604-3802 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3 604-3 802 bp Feature: gene Location: 3956-4438 bp Feature: domain Description: IS285 Location: 3986-4364 bp Feature: domain Description: IS285 Location: 3 986-43 64 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, group_II_RT_mat (TIGR04416), IS285 (COG3328)

Seq: BGSR01000066.1 Escherichia coli TUM18608 DNA, sequence066, whole genome shotgun sequence (3309 bp)
Overview 1 RT 1: 981-3062 bp Neighborhood of RT #1 [981, 3307] PHA02517 RVT-GII GIIM Feature: gene Location: 981-1214 bp Feature: gene Location: 1512-1871 bp Feature: domain Description: PHA02517 Location: 1515-1869 bp Feature: domain Description: PHA02517 Location: 1515-1869 bp Feature: gene Location: 1988-3307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2057-2789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2057-2789 bp Feature: domain Description: GIIM Note: maturase Location: 2864-3062 bp Feature: domain Description: GIIM Note: maturase Location: 2864 -3062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: BGSR01000086.1 Escherichia coli TUM18608 DNA, sequence086, whole genome shotgun sequence (985 bp)
Overview 1 RT 1: 1-984 bp Neighborhood of RT #1 [1, 983] RVT-GII Feature: gene Location: 1-363 bp Feature: gene Location: 657-983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII