myRT

myRT report for GCA_003300525.1_ASM330052v1

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Seq: BGSX01000023.1 Escherichia coli TUM18614 DNA, sequence023, whole genome shotgun sequence (76631 bp)
Overview 1 RT 1: 47994-54025 bp Neighborhood of RT #1 [47994, 54025] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 47994-48914 bp Feature: domain Description: AbiEii Location: 48036-48777 bp Feature: domain Description: AbiEii Location: 48036-48777 bp Feature: gene Location: 48901-49704 bp Feature: domain Description: AbiEi_3_N Location: 48934-49195 bp Feature: domain Description: AbiEi_3_N Location: 48934-491 95 bp Feature: domain Description: AbiEi_3 Location: 49207-49663 bp Feature: domain Description: AbiEi_3 Location: 49207-49663 bp Feature: gene Location: 49999-53208 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 50527-51016 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 50527-51 01 6 bp Feature: domain Description: nitrilase Location: 52522-53119 bp Feature: domain Description: nitrilase Location: 52522-531 1 9 bp Feature: gene Location: 53369-53509 bp Feature: domain Description: Phage_ASH Location: 53396-53489 bp Feature: domain Description: Phage_ASH Location: 53396-53489 bp Feature: gene Location: 53555-54025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: BGSX01000033.1 Escherichia coli TUM18614 DNA, sequence033, whole genome shotgun sequence (51839 bp)
Overview 1 RT 1: 24255-27320 bp Neighborhood of RT #1 [24255, 27320] RVT-GII GIIM RVT-GII Feature: gene Location: 24255-24425 bp Feature: gene Location: 24563-24742 bp Feature: gene Location: 24841-25362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24847-25129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4847-2 512 9 bp Feature: domain Description: GIIM Note: maturase Location: 25177-25357 bp Feature: domain Description: GIIM Note: maturase Location: 2 5177-2 5357 bp Feature: gene Location: 25390-25929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25720-25798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 572 0-2 5798 bp Feature: gene Location: 25960-26157 bp Feature: gene Location: 26415-27320 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BGSX01000079.1 Escherichia coli TUM18614 DNA, sequence079, whole genome shotgun sequence (2936 bp)
Overview 1 RT 1: 1-2892 bp Neighborhood of RT #1 [1, 2894] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 1-216 bp Feature: domain Description: PHA02517 Location: 4-151 bp Feature: domain Description: PHA02517 Location: 4-151 bp Feature: gene Location: 808-2331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1081-1813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1081-1813 bp Feature: domain Description: GIIM Note: maturase Location: 1888-2086 bp Feature: domain Description: GIIM Note: maturase Location: 1888-2086 bp Feature: gene Location: 2508-2894 bp Feature: domain Description: PHA02517 Location: 2511-2892 bp Feature: domain Description: PHA02517 Location: 2511-2892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)