myRT

myRT report for GCA_003300595.1_ASM330059v1

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Seq: BGSZ01000011.1 Escherichia coli TUM18616 DNA, sequence011, whole genome shotgun sequence (178615 bp)
Overview 1 RT 1: 104605-109670 bp Neighborhood of RT #1 [104605, 109738] Pox_D5 RVT-Retrons TIR_2 COG3378 PRK09678 Feature: gene Location: 104605-104781 bp Feature: gene Location: 105173-105325 bp Feature: domain Description: Pox_D5 Location: 105176-105299 bp Feature: domain Description: Pox_D5 Location: 1 051 76-1 05299 bp Feature: gene Location: 105563-107194 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 105878-106475 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 05878-1 06475 bp Feature: domain Description: TIR_2 Location: 106799-107156 bp Feature: domain Description: TIR_2 Location: 1 06799-1 071 56 bp Feature: gene Location: 107781-109424 bp Feature: domain Description: COG3378 Location: 107898-109413 bp Feature: domain Description: COG3378 Location: 1 07898-1 0941 3 bp Feature: gene Location: 109493-109738 bp Feature: domain Description: PRK09678 Location: 109496-109670 bp Feature: domain Description: PRK09678 Location: 1 09496-1 09670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Pox_D5 (pfam03288), RVT-Retrons, TIR_2 (pfam13676), COG3378 (Phage- or plasmid-associated DNA primase ), PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: BGSZ01000056.1 Escherichia coli TUM18616 DNA, sequence056, whole genome shotgun sequence (2271 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)