myRT

myRT report for GCA_003300635.1_ASM330063v1

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Seq: BGTA01000003.1 Escherichia coli TUM18617 DNA, sequence003, whole genome shotgun sequence (362401 bp)
Overview 1 RT 1: 3593-9226 bp Neighborhood of RT #1 [3593, 9279] PRK13889 RVT-UG16 DUF4755 Feature: gene Location: 3593-3958 bp Feature: gene Location: 4606-6099 bp Feature: domain Description: PRK13889 Location: 4609-5209 bp Feature: domain Description: PRK1 3889 Location: 4609-5209 bp Feature: gene Location: 6237-7721 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 6600-7008 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 6600-7008 bp Feature: gene Location: 7850-8383 bp Feature: gene Location: 8791-9279 bp Feature: domain Description: DUF4755 Location: 8923-9226 bp Feature: domain Description: DUF4755 Location: 8923-9226 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-UG16, DUF4755 (pfam15947)

Seq: BGTA01000018.1 Escherichia coli TUM18617 DNA, sequence018, whole genome shotgun sequence (109394 bp)
Overview 1 RT 1: 99748-105657 bp Neighborhood of RT #1 [99748, 105657] DUF4062 RVT-AbiP2 HTH_36 Feature: gene Location: 99748-100329 bp Feature: gene Location: 100367-101704 bp Feature: domain Description: DUF4062 Location: 100400-100643 bp Feature: domain Description: DUF4062 Location: 100400-100643 bp Feature: gene Location: 102105-103604 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 102537-102993 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 102 537-102 993 bp Feature: gene Location: 103812-104321 bp Feature: domain Description: HTH_36 Location: 103998-104154 bp Feature: domain Description: HTH_36 Location: 103998-104154 bp Feature: gene Location: 105232-105657 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4062 (pfam13271), RVT-AbiP2, HTH_36 (pfam13730)

Seq: BGTA01000036.1 Escherichia coli TUM18617 DNA, sequence036, whole genome shotgun sequence (12661 bp)
Overview 1 RT 1: 3-1077 bp Neighborhood of RT #1 [3, 1085] RVT-GII PRK10173 PRK10173 Feature: gene Location: 3-302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-141 bp Feature: gene Location: 341-652 bp Feature: domain Description: PRK10173 Location: 344-563 bp Feature: domain Description: PRK10173 Location: 3 44-563 bp Feature: gene Location: 636-1085 bp Feature: domain Description: PRK10173 Location: 639-1077 bp Feature: domain Description: PRK10173 Location: 63 9-1077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: BGTA01000037.1 Escherichia coli TUM18617 DNA, sequence037, whole genome shotgun sequence (11905 bp)
Overview 1 RT 1: 9678-11658 bp Neighborhood of RT #1 [9678, 11903] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 9678-10082 bp Feature: domain Description: InsE Location: 9708-10044 bp Feature: domain Description: InsE Location: 9708-1004 4 bp Feature: gene Location: 10111-10467 bp Feature: domain Description: PHA02517 Location: 10114-10423 bp Feature: domain Description: PHA02517 Location: 10114 -104 23 bp Feature: gene Location: 10584-11903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10653-11385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10653-11385 bp Feature: domain Description: GIIM Note: maturase Location: 11460-11658 bp Feature: domain Description: GIIM Note: maturase Location: 114 60-11658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: BGTA01000052.1 Escherichia coli TUM18617 DNA, sequence052, whole genome shotgun sequence (4048 bp)
Overview 1 RT 1: 3-2188 bp Neighborhood of RT #1 [3, 2922] RVT-GII rve Feature: gene Location: 3-329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: gene Location: 960-1178 bp Feature: gene Location: 1423-2922 bp Feature: domain Description: rve Location: 1795-2188 bp Feature: domain Description: rve Location: 1795 -2188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, rve (pfam00665)