myRT

myRT report for GCA_003300695.1_ASM330069v1

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Seq: BGTC01000009.1 Escherichia coli TUM18619 DNA, sequence009, whole genome shotgun sequence (164486 bp)
Overview 1 RT 1: 135849-141880 bp Neighborhood of RT #1 [135849, 141880] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 135849-136769 bp Feature: domain Description: AbiEii Location: 135891-136632 bp Feature: domain Description: AbiEii Location: 1 35891 -1 36632 bp Feature: gene Location: 136756-137559 bp Feature: domain Description: AbiEi_3_N Location: 136789-137050 bp Feature: domain Description: AbiEi_3_N Location: 1 36789-1 37050 bp Feature: domain Description: AbiEi_3 Location: 137062-137518 bp Feature: domain Description: AbiEi_3 Location: 1 37062-1 3751 8 bp Feature: gene Location: 137854-141063 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 138382-138871 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 38382-1 38871 bp Feature: domain Description: nitrilase Location: 140377-140974 bp Feature: domain Description: nitrilase Location: 1 40377-1 40974 bp Feature: gene Location: 141224-141364 bp Feature: domain Description: Phage_ASH Location: 141251-141344 bp Feature: domain Description: Phage_ASH Location: 1 41 251 -1 41 344 bp Feature: gene Location: 141410-141880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: BGTC01000022.1 Escherichia coli TUM18619 DNA, sequence022, whole genome shotgun sequence (76722 bp)
Overview 1 RT 1: 3-2430 bp Neighborhood of RT #1 [3, 2438] RVT-GII GIIM PHA02517 EmrE Feature: gene Location: 3-1322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 -804 bp Feature: domain Description: GIIM Note: maturase Location: 879-1077 bp Feature: domain Description: GIIM Note: maturase Location: 879-1077 bp Feature: gene Location: 1499-1885 bp Feature: domain Description: PHA02517 Location: 1502-1883 bp Feature: domain Description: PHA02 517 Location: 1502 -1883 bp Feature: gene Location: 2109-2438 bp Feature: domain Description: EmrE Location: 2127-2430 bp Feature: domain Description: EmrE Location: 2 12 7-2 430 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), EmrE (pfam13536)

Seq: BGTC01000056.1 Escherichia coli TUM18619 DNA, sequence056, whole genome shotgun sequence (16521 bp)
Overview 1 RT 1: 10142-14124 bp Neighborhood of RT #1 [10142, 14150] Asparaginase_2 RVT-GII DcuC Feature: gene Location: 10142-11173 bp Feature: domain Description: Asparaginase_2 Location: 10232-11165 bp Feature: domain Description: Asparaginase_2 Location: 1023 2-11165 bp Feature: gene Location: 11500-11649 bp Feature: gene Location: 11697-12143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12003-12105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12003 -12105 bp Feature: gene Location: 12365-12736 bp Feature: gene Location: 12789-14150 bp Feature: domain Description: DcuC Location: 12792-14124 bp Feature: domain Description: DcuC Location: 12792-14124 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII, DcuC (TIGR00771)

Seq: BGTC01000065.1 Escherichia coli TUM18619 DNA, sequence065, whole genome shotgun sequence (11765 bp)
Overview 1 RT 1: 3-1077 bp Neighborhood of RT #1 [3, 1085] RVT-GII PRK10173 PRK10173 Feature: gene Location: 3-302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-14 1 bp Feature: gene Location: 341-652 bp Feature: domain Description: PRK10173 Location: 344-563 bp Feature: domain Description: PRK10173 Location: 34 4 -563 bp Feature: gene Location: 636-1085 bp Feature: domain Description: PRK10173 Location: 639-1077 bp Feature: domain Description: PRK10173 Location: 639-1077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: BGTC01000101.1 Escherichia coli TUM18619 DNA, sequence101, whole genome shotgun sequence (919 bp)
Overview 1 RT 1: 3-916 bp Neighborhood of RT #1 [3, 916] RVT-GII Feature: gene Location: 3-329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: gene Location: 623-916 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII