myRT

myRT report for GCA_003301275.1_ASM330127v1

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Seq: BGTR01000002.1 Escherichia coli TUM18634 DNA, sequence002, whole genome shotgun sequence (605686 bp)
Overview 1 RT 1: 506998-512631 bp Neighborhood of RT #1 [506998, 512684] PRK13889 RVT-UG16 DUF4755 Feature: gene Location: 506998-507363 bp Feature: gene Location: 508011-509504 bp Feature: domain Description: PRK13889 Location: 508014-508614 bp Feature: domain Description: PRK1 3889 Location: 50801 4-50861 4 bp Feature: gene Location: 509642-511126 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 510005-510413 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 51 0005-51 041 3 bp Feature: gene Location: 511255-511788 bp Feature: gene Location: 512196-512684 bp Feature: domain Description: DUF4755 Location: 512328-512631 bp Feature: domain Description: DUF4755 Location: 51 2328-51 2631 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-UG16, DUF4755 (pfam15947)

Seq: BGTR01000009.1 Escherichia coli TUM18634 DNA, sequence009, whole genome shotgun sequence (204515 bp)
Overview 1 RT 1: 99747-105656 bp Neighborhood of RT #1 [99747, 105656] DUF4062 RVT-AbiP2 HTH_36 Feature: gene Location: 99747-100328 bp Feature: gene Location: 100366-101703 bp Feature: domain Description: DUF4062 Location: 100399-100642 bp Feature: domain Description: DUF4062 Location: 100399-100642 bp Feature: gene Location: 102104-103603 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 102536-102992 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 102 536-102 992 bp Feature: gene Location: 103811-104320 bp Feature: domain Description: HTH_36 Location: 103997-104153 bp Feature: domain Description: HTH_36 Location: 103997-104153 bp Feature: gene Location: 105231-105656 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4062 (pfam13271), RVT-AbiP2, HTH_36 (pfam13730)

Seq: BGTR01000025.1 Escherichia coli TUM18634 DNA, sequence025, whole genome shotgun sequence (23431 bp)
Overview 1 RT 1: 21204-23184 bp Neighborhood of RT #1 [21204, 23429] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 21204-21608 bp Feature: domain Description: InsE Location: 21234-21570 bp Feature: domain Description: InsE Location: 2123 4-21570 bp Feature: gene Location: 21637-21993 bp Feature: domain Description: PHA02517 Location: 21640-21949 bp Feature: domain Description: PHA02517 Location: 21640-21949 bp Feature: gene Location: 22110-23429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22179-22911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22179-22911 bp Feature: domain Description: GIIM Note: maturase Location: 22986-23184 bp Feature: domain Description: GIIM Note: maturase Location: 22986-23 184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: BGTR01000027.1 Escherichia coli TUM18634 DNA, sequence027, whole genome shotgun sequence (12505 bp)
Overview 1 RT 1: 3-1077 bp Neighborhood of RT #1 [3, 1085] RVT-GII PRK10173 PRK10173 Feature: gene Location: 3-302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-14 1 bp Feature: gene Location: 341-652 bp Feature: domain Description: PRK10173 Location: 344-563 bp Feature: domain Description: PRK10173 Location: 34 4 -563 bp Feature: gene Location: 636-1085 bp Feature: domain Description: PRK10173 Location: 639-1077 bp Feature: domain Description: PRK10173 Location: 639-1077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: BGTR01000061.1 Escherichia coli TUM18634 DNA, sequence061, whole genome shotgun sequence (1329 bp)
Overview 1 RT 1: 3-1263 bp Neighborhood of RT #1 [3, 1328] RVT-GII PHA02517 Feature: gene Location: 3-329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: gene Location: 921-1328 bp Feature: domain Description: PHA02517 Location: 924-1263 bp Feature: domain Description: PHA025 17 Location: 924-1263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)