myRT

myRT report for GCA_003301395.1_ASM330139v1

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Seq: BGTV01000007.1 Escherichia coli TUM18638 DNA, sequence07, whole genome shotgun sequence (248891 bp)
Overview 1 RT 1: 232868-241452 bp Neighborhood of RT #1 [232868, 241694] AidA AidA YeeP RVT-UG1 GerD Feature: gene Location: 232868-235789 bp Feature: domain Description: AidA Location: 232982-234944 bp Feature: domain Description: AidA Location: 232982-234944 bp Feature: domain Description: AidA Location: 234983-235397 bp Feature: domain Description: AidA Location: 234983-235397 bp Feature: gene Location: 236087-236959 bp Feature: domain Description: YeeP Location: 236090-236957 bp Feature: domain Description: YeeP Location: 236090-236957 bp Feature: gene Location: 237563-240034 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 238175-238685 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 2381 75-238685 bp Feature: gene Location: 240136-241251 bp Feature: gene Location: 241260-241694 bp Feature: domain Description: GerD Location: 241338-241452 bp Feature: domain Description: GerD Location: 241 338-241 452 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AidA (COG3468), YeeP (COG3596), RVT-UG1, GerD (pfam17898)

Seq: BGTV01000034.1 Escherichia coli TUM18638 DNA, sequence34, whole genome shotgun sequence (11765 bp)
Overview 1 RT 1: 3-1077 bp Neighborhood of RT #1 [3, 1085] RVT-GII PRK10173 PRK10173 Feature: gene Location: 3-302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 -141 bp Feature: gene Location: 341-652 bp Feature: domain Description: PRK10173 Location: 344-563 bp Feature: domain Description: PRK10173 Location: 344-563 bp Feature: gene Location: 636-1085 bp Feature: domain Description: PRK10173 Location: 639-1077 bp Feature: domain Description: PRK10173 Location: 639-1077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: BGTV01000046.1 Escherichia coli TUM18638 DNA, sequence46, whole genome shotgun sequence (3877 bp)
Overview 1 RT 1: 3-2190 bp Neighborhood of RT #1 [3, 2228] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 3-1322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-804 bp Feature: domain Description: GIIM Note: maturase Location: 879-1077 bp Feature: domain Description: GIIM Note: maturase Location: 879-1077 bp Feature: gene Location: 1439-1795 bp Feature: domain Description: PHA02517 Location: 1442-1751 bp Feature: domain Description: PHA02517 Location: 1442-1751 bp Feature: gene Location: 1824-2228 bp Feature: domain Description: InsE Location: 1854-2190 bp Feature: domain Description: InsE Location: 1854-2190 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: BGTV01000058.1 Escherichia coli TUM18638 DNA, sequence58, whole genome shotgun sequence (1632 bp)
Overview 1 RT 1: 3-1628 bp Neighborhood of RT #1 [3, 1630] RVT-GII InsE Feature: gene Location: 3-329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: gene Location: 960-1178 bp Feature: gene Location: 1400-1630 bp Feature: domain Description: InsE Location: 1403-1628 bp Feature: domain Description: InsE Location: 14 03-1628 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, InsE (COG2963)