myRT

myRT report for GCA_003301455.1_ASM330145v1

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Seq: BGTX01000008.1 Escherichia coli TUM18640 DNA, sequence008, whole genome shotgun sequence (150219 bp)
Overview 1 RT 1: 49459-53341 bp Neighborhood of RT #1 [49459, 53346] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 49459-49917 bp Feature: domain Description: dut Location: 49465-49912 bp Feature: domain Description: dut Location: 49465-4991 2 bp Feature: gene Location: 50024-50620 bp Feature: domain Description: slmA Location: 50030-50606 bp Feature: domain Description: slmA Location: 50030-50606 bp Feature: gene Location: 50666-51625 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50801-51350 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50801 -51 350 bp Feature: gene Location: 51923-52579 bp Feature: domain Description: pyrE Location: 51941-52574 bp Feature: domain Description: pyrE Location: 51 941 -52574 bp Feature: gene Location: 52630-53346 bp Feature: domain Description: rph Location: 52633-53341 bp Feature: domain Description: rph Location: 52633-53341 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: BGTX01000115.1 Escherichia coli TUM18640 DNA, sequence115, whole genome shotgun sequence (2769 bp)
Overview 1 RT 1: 1-2595 bp Neighborhood of RT #1 [1, 2630] RVT-GII GIIM PHA02517 Feature: gene Location: 1-153 bp Feature: gene Location: 784-2307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1057-1789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1057-1789 bp Feature: domain Description: GIIM Note: maturase Location: 1864-2062 bp Feature: domain Description: GIIM Note: maturase Location: 1864-2 062 bp Feature: gene Location: 2472-2630 bp Feature: domain Description: PHA02517 Location: 2475-2595 bp Feature: domain Description: PHA02 517 Location: 2 475-2 595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)