myRT

myRT report for GCA_003301585.1_ASM330158v1

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Seq: BGUA01000027.1 Escherichia coli TUM18643 DNA, sequence027, whole genome shotgun sequence (35523 bp)
Overview 1 RT 1: 16463-20388 bp Neighborhood of RT #1 [16463, 20402] Transposase_20 InsG RVT-GII GIIM rve_2 Feature: gene Location: 16463-17236 bp Feature: domain Description: Transposase_20 Location: 16892-17138 bp Feature: domain Description: Transposase_20 Location: 1 6892-1 71 38 bp Feature: gene Location: 17240-17854 bp Feature: domain Description: InsG Location: 17243-17834 bp Feature: domain Description: InsG Location: 1 7243-1 7834 bp Feature: gene Location: 18241-19629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18571-19189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8571 -1 91 89 bp Feature: domain Description: GIIM Note: maturase Location: 19237-19468 bp Feature: domain Description: GIIM Note: maturase Location: 1 9237-1 9468 bp Feature: gene Location: 19857-20174 bp Feature: gene Location: 20250-20402 bp Feature: domain Description: rve_2 Location: 20280-20388 bp Feature: domain Description: rve_2 Location: 20280-20388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_20 (pfam02371), InsG (COG3385), RVT-GII, GIIM (pfam08388), rve_2 (pfam13333)

Seq: BGUA01000038.1 Escherichia coli TUM18643 DNA, sequence038, whole genome shotgun sequence (14464 bp)
Overview 1 RT 1: 4853-7883 bp Neighborhood of RT #1 [4853, 7933] RVT-GII COG3547 COG3547 Feature: gene Location: 4853-5053 bp Feature: gene Location: 5061-5201 bp Feature: gene Location: 5235-6692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5643-6330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5643-6330 bp Feature: gene Location: 6931-7326 bp Feature: domain Description: COG3547 Location: 6949-7240 bp Feature: domain Description: COG3547 Location: 6949-72 40 bp Feature: gene Location: 7385-7933 bp Feature: domain Description: COG3547 Location: 7397-7883 bp Feature: domain Description: COG3547 Location: 7397-7883 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, COG3547 (Transposase )

Seq: BGUA01000039.1 Escherichia coli TUM18643 DNA, sequence039, whole genome shotgun sequence (11096 bp)
Overview 1 RT 1: 3606-11093 bp Neighborhood of RT #1 [3606, 11093] RVT-GII DDE_Tnp_IS66 HTH_23 InsE RVT-GII RVT-GII Feature: gene Location: 3606-3881 bp Feature: gene Location: 4077-4238 bp Feature: gene Location: 4320-5030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4521-5022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4521-5022 bp Feature: gene Location: 5025-5444 bp Feature: gene Location: 5482-5871 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5587-5830 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5587-583 0 bp Feature: gene Location: 7290-7940 bp Feature: domain Description: HTH_23 Location: 7341-7440 bp Feature: domain Description: HTH_23 Location: 73 41-7440 bp Feature: domain Description: InsE Location: 7566-7917 bp Feature: domain Description: InsE Location: 7566-7917 bp Feature: gene Location: 8312-8515 bp Feature: gene Location: 8922-9296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8928-9099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8928-9099 bp Feature: gene Location: 9312-10124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9585-10041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9585-10041 bp Feature: gene Location: 10245-10448 bp Feature: gene Location: 10635-11093 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_IS66 (pfam03050), HTH_23 (pfam13384), InsE (COG2963)