myRT

myRT report for GCA_003301615.1_ASM330161v1

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Seq: NRWI01000083.1 Escherichia coli strain A71 NODE_16_length_61391_cov_85.4265, whole genome shotgun sequence (61391 bp)
Overview 1 RT 1: 44585-47074 bp Neighborhood of RT #1 [44585, 47139] RVT-GII Inovirus_Gp2 Feature: gene Location: 44585-44758 bp Feature: gene Location: 44792-45100 bp Feature: gene Location: 45087-46250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45201-45888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45201 -45888 bp Feature: gene Location: 46397-46543 bp Feature: gene Location: 46576-47139 bp Feature: domain Description: Inovirus_Gp2 Location: 46633-47074 bp Feature: domain Description: Inovirus_Gp2 Location: 46633-47074 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Inovirus_Gp2 (pfam11726)

Seq: NRWI01000019.1 Escherichia coli strain A71 NODE_33_length_10130_cov_29.5898, whole genome shotgun sequence (10130 bp)
Overview 1 RT 1: 3626-6541 bp Neighborhood of RT #1 [3626, 6606] RVT-GII GIIM PHA02517 Feature: gene Location: 3626-3769 bp Feature: gene Location: 3794-3979 bp Feature: gene Location: 4066-5589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4339-5071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4339-5071 bp Feature: domain Description: GIIM Note: maturase Location: 5146-5344 bp Feature: domain Description: GIIM Note: maturase Location: 5146-5344 bp Feature: gene Location: 5543-5968 bp Feature: gene Location: 6181-6606 bp Feature: domain Description: PHA02517 Location: 6205-6541 bp Feature: domain Description: PHA02 517 Location: 62 05-6541 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: NRWI01000077.1 Escherichia coli strain A71 NODE_36_length_7785_cov_29.5915, whole genome shotgun sequence (7785 bp)
Overview 1 RT 1: 1-3333 bp Neighborhood of RT #1 [1, 3333] PRK11447 RAYT RVT-GII GIIM RVT-GII Feature: gene Location: 1-213 bp Feature: domain Description: PRK11447 Location: 4-211 bp Feature: domain Description: PRK11447 Location: 4-211 bp Feature: gene Location: 560-1177 bp Feature: domain Description: RAYT Location: 716-1079 bp Feature: domain Description: RAYT Location: 716-1079 bp Feature: gene Location: 1252-1947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1255-1507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1255-1507 bp Feature: domain Description: GIIM Note: maturase Location: 1555-1786 bp Feature: domain Description: GIIM Note: maturase Location: 1555-1786 bp Feature: gene Location: 1954-2598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2242-2593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2242-2593 bp Feature: gene Location: 2629-2826 bp Feature: gene Location: 3190-3333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11447 (cellulose synthase subunit BcsC; Provisional), RVT-GII, GIIM (pfam08388), RAYT (COG1943)

Seq: NRWI01000028.1 Escherichia coli strain A71 NODE_8_length_185250_cov_90.5972, whole genome shotgun sequence (185250 bp)
Overview 1 RT 1: 68082-72265 bp Neighborhood of RT #1 [68082, 72369] PRK09692 RVT-Retrons PRK09678 Feature: gene Location: 68082-69260 bp Feature: domain Description: PRK09692 Location: 68091-69252 bp Feature: domain Description: PRK09692 Location: 68091-69252 bp Feature: gene Location: 69447-70097 bp Feature: gene Location: 70098-71591 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 70803-71361 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 70803-71361 bp Feature: gene Location: 71872-72006 bp Feature: gene Location: 72094-72369 bp Feature: domain Description: PRK09678 Location: 72103-72265 bp Feature: domain Description: PRK09678 Location: 72103-72265 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional)