myRT

myRT report for GCA_003301735.1_ASM330173v1

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Seq: NRWO01000110.1 Escherichia coli strain 1257 NODE_110_length_2272_cov_285.821, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1 098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 73-1 371 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NRWO01000057.1 Escherichia coli strain 1257 NODE_57_length_16689_cov_52.7207, whole genome shotgun sequence (16689 bp)
Overview 1 RT 1: 1344-5780 bp Neighborhood of RT #1 [1344, 5788] DDE_Tnp_IS1 InsA RVT-GII PRK10276 umuC Feature: gene Location: 1344-1721 bp Feature: domain Description: DDE_Tnp_IS1 Location: 1347-1719 bp Feature: domain Description: DDE_Tnp_IS1 Location: 1347-1719 bp Feature: gene Location: 1766-2041 bp Feature: domain Description: InsA Location: 1769-2036 bp Feature: domain Description: InsA Location: 1769-2 036 bp Feature: gene Location: 2193-3680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2598-3288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 598-32 88 bp Feature: gene Location: 3705-4517 bp Feature: domain Description: PRK10276 Location: 4137-4500 bp Feature: domain Description: PRK102 76 Location: 4137-4500 bp Feature: gene Location: 4517-5788 bp Feature: domain Description: umuC Location: 4520-5780 bp Feature: domain Description: umuC Location: 452 0-5780 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: NRWO01000077.1 Escherichia coli strain 1257 NODE_77_length_9563_cov_83.7402, whole genome shotgun sequence (9563 bp)
Overview 1 RT 1: 11-4654 bp Neighborhood of RT #1 [11, 4695] InsE YeeP RVT_N RVT-GII YkfC DUF932 Feature: gene Location: 11-349 bp Feature: domain Description: InsE Location: 23-293 bp Feature: domain Description: InsE Location: 23 -293 bp Feature: gene Location: 550-1413 bp Feature: domain Description: YeeP Location: 553-1411 bp Feature: domain Description: YeeP Location: 553 -1411 bp Feature: gene Location: 1709-3418 bp Feature: RT Description: RVT_N Location: 1763-2006 bp Feature: RT Description: RVT_N Location: 1763 -2006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2051-2687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2051-2687 bp Feature: domain Description: YkfC Location: 2807-3023 bp Feature: domain Description: YkfC Location: 2807-3 023 bp Feature: gene Location: 3459-3713 bp Feature: gene Location: 4117-4695 bp Feature: domain Description: DUF932 Location: 4126-4654 bp Feature: domain Description: DUF93 2 Location: 4126-4654 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), DUF932 (pfam06067), YeeP (COG3596)