myRT

myRT report for GCA_003301845.1_ASM330184v1

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Seq: NRWV01000079.1 Escherichia coli strain A255 NODE_31_length_30385_cov_82.3244, whole genome shotgun sequence (30385 bp)
Overview 1 RT 1: 11974-16814 bp Neighborhood of RT #1 [11974, 16814] DUF3987 Inovirus_Gp2 RVT-GII Feature: gene Location: 11974-13407 bp Feature: domain Description: DUF3987 Location: 12067-13144 bp Feature: domain Description: DUF3987 Location: 1 2067-1 31 44 bp Feature: gene Location: 14266-14829 bp Feature: domain Description: Inovirus_Gp2 Location: 14323-14764 bp Feature: domain Description: Inovirus_Gp2 Location: 1 4323-1 4764 bp Feature: gene Location: 15155-16318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15269-15956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5269-1 5956 bp Feature: gene Location: 16305-16613 bp Feature: gene Location: 16647-16814 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3987 (pfam13148), Inovirus_Gp2 (pfam11726), RVT-GII

Seq: NRWV01000058.1 Escherichia coli strain A255 NODE_38_length_17943_cov_48.9411, whole genome shotgun sequence (17943 bp)
Overview 1 RT 1: 4519-7782 bp Neighborhood of RT #1 [4519, 7782] PRK11447 RAYT RVT-GII GIIM Feature: gene Location: 4519-4659 bp Feature: domain Description: PRK11447 Location: 4522-4630 bp Feature: domain Description: PRK11447 Location: 452 2 -4630 bp Feature: gene Location: 5006-5545 bp Feature: domain Description: RAYT Location: 5084-5447 bp Feature: domain Description: RAYT Location: 5084-5447 bp Feature: gene Location: 5701-7047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5989-6607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5989-6607 bp Feature: domain Description: GIIM Note: maturase Location: 6655-6886 bp Feature: domain Description: GIIM Note: maturase Location: 6655-6886 bp Feature: gene Location: 7078-7275 bp Feature: gene Location: 7639-7782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11447 (cellulose synthase subunit BcsC; Provisional), RAYT (COG1943), RVT-GII, GIIM (pfam08388)

Seq: NRWV01000070.1 Escherichia coli strain A255 NODE_7_length_185255_cov_87.2407, whole genome shotgun sequence (185255 bp)
Overview 1 RT 1: 68082-72265 bp Neighborhood of RT #1 [68082, 72369] PRK09692 RVT-Retrons PRK09678 Feature: gene Location: 68082-69260 bp Feature: domain Description: PRK09692 Location: 68091-69252 bp Feature: domain Description: PRK09692 Location: 68091-69252 bp Feature: gene Location: 69447-70097 bp Feature: gene Location: 70098-71591 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 70803-71361 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 70803 -713 61 bp Feature: gene Location: 71872-72006 bp Feature: gene Location: 72094-72369 bp Feature: domain Description: PRK09678 Location: 72103-72265 bp Feature: domain Description: PRK09678 Location: 72103 -72265 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional)