myRT

myRT report for GCA_003301915.1_ASM330191v1

Download annotations/find similar RTs

Seq: NRWY01000129.1 Escherichia coli strain A426 NODE_2_length_292745_cov_91.929, whole genome shotgun sequence (292745 bp)
Overview 1 RT 1: 244119-250155 bp Neighborhood of RT #1 [244119, 250172] PRK09692 RVT-UG5 nitrilase Psu Feature: gene Location: 244119-244343 bp Feature: gene Location: 244488-245744 bp Feature: domain Description: PRK09692 Location: 244497-245700 bp Feature: domain Description: PRK09692 Location: 244497-245700 bp Feature: gene Location: 245836-248712 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 246310-246838 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24631 0-246838 bp Feature: domain Description: nitrilase Location: 248050-248632 bp Feature: domain Description: nitrilase Location: 248050-248632 bp Feature: gene Location: 248709-249398 bp Feature: gene Location: 249600-250172 bp Feature: domain Description: Psu Location: 249618-250155 bp Feature: domain Description: Psu Location: 24961 8-2501 55 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG5, nitrilase (cl11424), Psu (pfam07455)

Seq: NRWY01000069.1 Escherichia coli strain A426 NODE_47_length_22753_cov_84.9628, whole genome shotgun sequence (22753 bp)
Overview 1 RT 1: 19296-21785 bp Neighborhood of RT #1 [19296, 21850] RVT-GII Inovirus_Gp2 Feature: gene Location: 19296-19469 bp Feature: gene Location: 19503-19811 bp Feature: gene Location: 19798-20961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19912-20599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19912 -2 0599 bp Feature: gene Location: 21287-21850 bp Feature: domain Description: Inovirus_Gp2 Location: 21344-21785 bp Feature: domain Description: Inovirus_Gp2 Location: 2 1344-2 1785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Inovirus_Gp2 (pfam11726)

Seq: NRWY01000006.1 Escherichia coli strain A426 NODE_57_length_10683_cov_55.992, whole genome shotgun sequence (10683 bp)
Overview 1 RT 1: 3-6104 bp Neighborhood of RT #1 [3, 6104] PRK11447 RAYT RVT-GII GIIM Feature: gene Location: 3-2981 bp Feature: domain Description: PRK11447 Location: 6-2982 bp Feature: domain Description: PRK11447 Location: 6-2982 bp Feature: gene Location: 3328-3867 bp Feature: domain Description: RAYT Location: 3406-3769 bp Feature: domain Description: RAYT Location: 3 406-3 769 bp Feature: gene Location: 4023-5369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4311-4929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 11-4929 bp Feature: domain Description: GIIM Note: maturase Location: 4977-5208 bp Feature: domain Description: GIIM Note: maturase Location: 4977-5208 bp Feature: gene Location: 5400-5597 bp Feature: gene Location: 5961-6104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11447 (cellulose synthase subunit BcsC; Provisional), RAYT (COG1943), RVT-GII, GIIM (pfam08388)