myRT

myRT report for GCA_003302175.1_ASM330217v1

Download annotations/find similar RTs

Seq: BGUJ01000008.1 Escherichia coli TUM18652 DNA, sequence008, whole genome shotgun sequence (166209 bp)
Overview 1 RT 1: 137572-143603 bp Neighborhood of RT #1 [137572, 143603] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 137572-138492 bp Feature: domain Description: AbiEii Location: 137614-138355 bp Feature: domain Description: AbiEii Location: 1 3761 4-1 38355 bp Feature: gene Location: 138479-139282 bp Feature: domain Description: AbiEi_3_N Location: 138512-138773 bp Feature: domain Description: AbiEi_3_N Location: 1 3851 2-1 38773 bp Feature: domain Description: AbiEi_3 Location: 138785-139241 bp Feature: domain Description: AbiEi_3 Location: 1 38785-1 39241 bp Feature: gene Location: 139577-142786 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 140105-140594 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 401 05-1 40594 bp Feature: domain Description: nitrilase Location: 142100-142697 bp Feature: domain Description: nitrilase Location: 1 421 00-1 42697 bp Feature: gene Location: 142947-143087 bp Feature: domain Description: Phage_ASH Location: 142974-143067 bp Feature: domain Description: Phage_ASH Location: 1 42974-1 43067 bp Feature: gene Location: 143133-143603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: BGUJ01000054.1 Escherichia coli TUM18652 DNA, sequence054, whole genome shotgun sequence (16521 bp)
Overview 1 RT 1: 10142-14124 bp Neighborhood of RT #1 [10142, 14150] Asparaginase_2 RVT-GII DcuC Feature: gene Location: 10142-11173 bp Feature: domain Description: Asparaginase_2 Location: 10232-11165 bp Feature: domain Description: Asparaginase_2 Location: 102 32 -11165 bp Feature: gene Location: 11500-11649 bp Feature: gene Location: 11697-12143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12003-12105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 003-12 105 bp Feature: gene Location: 12365-12736 bp Feature: gene Location: 12789-14150 bp Feature: domain Description: DcuC Location: 12792-14124 bp Feature: domain Description: DcuC Location: 12 792 -1412 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII, DcuC (TIGR00771)

Seq: BGUJ01000094.1 Escherichia coli TUM18652 DNA, sequence094, whole genome shotgun sequence (2206 bp)
Overview 1 RT 1: 93-2203 bp Neighborhood of RT #1 [93, 2203] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 66-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173 -13 71 bp Feature: gene Location: 1910-2203 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)