myRT

myRT report for GCA_003302435.1_ASM330243v1

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Seq: NRXZ01000114.1 Escherichia coli strain 740 NODE_1_length_292141_cov_122.239, whole genome shotgun sequence (292141 bp)
Overview 1 RT 1: 258857-267263 bp Neighborhood of RT #1 [258857, 267271] prfC PRK10597 RVT-Retrons TIR_2 phage_tail_N Peptidase_S74 APC_N_CC Feature: gene Location: 258857-260443 bp Feature: domain Description: prfC Location: 258875-260441 bp Feature: domain Description: prfC Location: 258875-260441 bp Feature: gene Location: 260663-260923 bp Feature: domain Description: PRK10597 Location: 260666-260906 bp Feature: domain Description: PRK1 0597 Location: 260666-260906 bp Feature: gene Location: 261281-262885 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 261572-262163 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 261 572-2621 63 bp Feature: domain Description: TIR_2 Location: 262490-262823 bp Feature: domain Description: TIR_2 Location: 262490-262823 bp Feature: gene Location: 263215-263388 bp Feature: gene Location: 263513-267271 bp Feature: domain Description: phage_tail_N Location: 263516-263915 bp Feature: domain Description: phage_tail_N Location: 26351 6-26391 5 bp Feature: domain Description: Peptidase_S74 Location: 266840-266987 bp Feature: domain Description: Peptidase_S74 Location: 266840-266987 bp Feature: domain Description: APC_N_CC Location: 267140-267263 bp Feature: domain Description: APC_N_CC Location: 2671 40-267263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), PRK10597 (DNA damage-inducible protein I; Provisional), RVT-Retrons, TIR_2 (pfam13676), phage_tail_N (pfam08400), Peptidase_S74 (pfam13884), APC_N_CC (pfam16689)

Seq: NRXZ01000004.1 Escherichia coli strain 740 NODE_50_length_20643_cov_129.295, whole genome shotgun sequence (20643 bp)
Overview 1 RT 1: 16953-19842 bp Neighborhood of RT #1 [16953, 19842] RVT-GII GIIM RVT-GII Feature: gene Location: 16953-17171 bp Feature: gene Location: 17214-17384 bp Feature: gene Location: 17547-18200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17550-17958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17550-17958 bp Feature: domain Description: GIIM Note: maturase Location: 18006-18198 bp Feature: domain Description: GIIM Note: maturase Location: 18006-18198 bp Feature: gene Location: 18173-18607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18365-18581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18365-18581 bp Feature: gene Location: 18776-18973 bp Feature: gene Location: 19516-19842 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)