myRT

myRT report for GCA_003302565.1_ASM330256v1

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Seq: NRYI01000091.1 Escherichia coli strain A408 NODE_2_length_319210_cov_84.6903, whole genome shotgun sequence (319210 bp)
Overview 1 RT 1: 51254-60330 bp Neighborhood of RT #1 [51254, 60332] Ail_Lom phage_tail_N Peptidase_S74 APC_N_CC RVT-Retrons TIR_2 PRK10597 prfC Feature: gene Location: 51254-51853 bp Feature: domain Description: Ail_Lom Location: 51257-51851 bp Feature: domain Description: Ail_Lom Location: 51 257-51 851 bp Feature: gene Location: 51918-55676 bp Feature: domain Description: phage_tail_N Location: 51921-52320 bp Feature: domain Description: phage_tail_N Location: 51 921 -52320 bp Feature: domain Description: Peptidase_S74 Location: 55245-55392 bp Feature: domain Description: Peptidase_S74 Location: 55245-55392 bp Feature: domain Description: APC_N_CC Location: 55545-55668 bp Feature: domain Description: APC_N_CC Location: 55545-55668 bp Feature: gene Location: 56304-57908 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 56595-57186 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 56595-571 86 bp Feature: domain Description: TIR_2 Location: 57513-57846 bp Feature: domain Description: TIR_2 Location: 5751 3-57846 bp Feature: gene Location: 58266-58526 bp Feature: domain Description: PRK10597 Location: 58269-58509 bp Feature: domain Description: PRK1 0597 Location: 58269-58509 bp Feature: gene Location: 58746-60332 bp Feature: domain Description: prfC Location: 58764-60330 bp Feature: domain Description: prfC Location: 58764-60330 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: NRYI01000095.1 Escherichia coli strain A408 NODE_4_length_208408_cov_71.1622, whole genome shotgun sequence (208408 bp)
Overview 1 RT 1: 15058-17478 bp Neighborhood of RT #1 [15058, 17478] RVT-Retrons HTH_XRE Feature: gene Location: 15058-15252 bp Feature: gene Location: 15251-15688 bp Feature: gene Location: 15813-16763 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15993-16536 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15993-16536 bp Feature: gene Location: 16741-17061 bp Feature: domain Description: HTH_XRE Location: 16765-16930 bp Feature: domain Description: HTH_XRE Location: 16765-16930 bp Feature: gene Location: 17086-17478 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: NRYI01000029.1 Escherichia coli strain A408 NODE_67_length_8147_cov_90.1511, whole genome shotgun sequence (8147 bp)
Overview 1 RT 1: 4435-7324 bp Neighborhood of RT #1 [4435, 7324] RVT-GII GIIM RVT-GII Feature: gene Location: 4435-4653 bp Feature: gene Location: 4696-4866 bp Feature: gene Location: 5029-5682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5032-5440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 503 2-5440 bp Feature: domain Description: GIIM Note: maturase Location: 5488-5680 bp Feature: domain Description: GIIM Note: maturase Location: 5488-5680 bp Feature: gene Location: 5655-6089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5847-6063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5847-6063 bp Feature: gene Location: 6258-6455 bp Feature: gene Location: 6998-7324 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: NRYI01000092.1 Escherichia coli strain A408 NODE_85_length_4443_cov_80.1611, whole genome shotgun sequence (4443 bp)
Overview 1 RT 1: 190-2665 bp Neighborhood of RT #1 [190, 2730] RVT-GII GIIM PHA02517 Feature: gene Location: 190-1713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 63-1195 bp Feature: domain Description: GIIM Note: maturase Location: 1270-1468 bp Feature: domain Description: GIIM Note: maturase Location: 1270-14 68 bp Feature: gene Location: 1667-2092 bp Feature: gene Location: 2305-2730 bp Feature: domain Description: PHA02517 Location: 2329-2665 bp Feature: domain Description: PHA02517 Location: 2329-2665 bp Sorry, your browser does not support inline SVG.
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