myRT

myRT report for GCA_003302685.1_ASM330268v1

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Seq: NRYP01000105.1 Escherichia coli strain A264 NODE_25_length_84553_cov_58.0275, whole genome shotgun sequence (84553 bp)
Overview 1 RT 1: 37645-43985 bp Neighborhood of RT #1 [37645, 43990] phage_tail_N Collar Caudo_TAP RVT-UG17 SLATT_5 PRK10597 Feature: gene Location: 37645-40923 bp Feature: domain Description: phage_tail_N Location: 37648-38047 bp Feature: domain Description: phage_tail_N Location: 37648-38047 bp Feature: domain Description: Collar Location: 40243-40381 bp Feature: domain Description: Collar Location: 40243-40381 bp Feature: gene Location: 40923-41507 bp Feature: domain Description: Caudo_TAP Location: 41139-41496 bp Feature: domain Description: Caudo_TAP Location: 41 1 39-41 496 bp Feature: gene Location: 41620-42990 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 41848-42454 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 41 848-42454 bp Feature: gene Location: 42968-43519 bp Feature: domain Description: SLATT_5 Location: 42974-43490 bp Feature: domain Description: SLATT_5 Location: 42974-43490 bp Feature: gene Location: 43742-43990 bp Feature: domain Description: PRK10597 Location: 43745-43985 bp Feature: domain Description: PRK1 0597 Location: 43745-43985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT phage_tail_N (pfam08400), Collar (pfam07484), Caudo_TAP (pfam02413), RVT-UG17, SLATT_5 (pfam18160), PRK10597 (DNA damage-inducible protein I; Provisional)

Seq: NRYP01000128.1 Escherichia coli strain A264 NODE_45_length_28725_cov_67.7228, whole genome shotgun sequence (28725 bp)
Overview 1 RT 1: 48-3204 bp Neighborhood of RT #1 [48, 3221] DDE_Tnp_IS1 InsA RVT-GII PRK10276 Feature: gene Location: 48-551 bp Feature: domain Description: DDE_Tnp_IS1 Location: 159-549 bp Feature: domain Description: DDE_Tnp_IS1 Location: 159-549 bp Feature: gene Location: 470-745 bp Feature: domain Description: InsA Location: 473-737 bp Feature: domain Description: InsA Location: 473-737 bp Feature: gene Location: 897-1907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 903-1515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 903-1515 bp Feature: gene Location: 1882-2484 bp Feature: gene Location: 2538-3221 bp Feature: domain Description: PRK10276 Location: 2841-3204 bp Feature: domain Description: PRK102 76 Location: 2 841-32 04 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)