myRT

myRT report for GCA_003302895.1_ASM330289v1

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Seq: NRYY01000185.1 Escherichia coli strain A276 NODE_46_length_24271_cov_72.1439, whole genome shotgun sequence (24271 bp)
Overview 1 RT 1: 9548-13840 bp Neighborhood of RT #1 [9548, 14001] cbl RVT-UG12 Phage_int_SAM_2 Integrase_1 Feature: gene Location: 9548-10498 bp Feature: domain Description: cbl Location: 9551-10496 bp Feature: domain Description: cbl Location: 9551 -1 0496 bp Feature: gene Location: 10816-11034 bp Feature: gene Location: 11226-12521 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 11577-12012 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 1 1 577-1 201 2 bp Feature: gene Location: 12518-12781 bp Feature: gene Location: 13090-14001 bp Feature: domain Description: Phage_int_SAM_2 Location: 13093-13363 bp Feature: domain Description: Phage_int_SAM_2 Location: 1 3093-1 3363 bp Feature: domain Description: Integrase_1 Location: 13396-13840 bp Feature: domain Description: Integrase_1 Location: 1 3396-1 3840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cbl (PRK12679), RVT-UG12, Phage_int_SAM_2 (pfam12834), Integrase_1 (pfam12835)

Seq: NRYY01000184.1 Escherichia coli strain A276 NODE_70_length_4951_cov_102.786, whole genome shotgun sequence (4951 bp)
Overview 1 RT 1: 1393-3813 bp Neighborhood of RT #1 [1393, 3813] RVT-Retrons HTH_XRE Feature: gene Location: 1393-1587 bp Feature: gene Location: 1586-2023 bp Feature: gene Location: 2148-3098 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2328-2871 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 32 8-2 871 bp Feature: gene Location: 3076-3396 bp Feature: domain Description: HTH_XRE Location: 3100-3265 bp Feature: domain Description: HTH_XRE Location: 3100-32 65 bp Feature: gene Location: 3421-3813 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_XRE (smart00530)

Seq: NRYY01000078.1 Escherichia coli strain A276 NODE_78_length_3516_cov_69.753, whole genome shotgun sequence (3516 bp)
Overview 1 RT 1: 2-3507 bp Neighborhood of RT #1 [2, 3515] RVT-AbiP2 Q Feature: gene Location: 2-211 bp Feature: gene Location: 315-533 bp Feature: gene Location: 699-2243 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1116-1569 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1116-1569 bp Feature: gene Location: 2438-2590 bp Feature: gene Location: 2637-3515 bp Feature: domain Description: Q Location: 2640-3507 bp Feature: domain Description: Q Location: 2640-3 507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, Q (PHA02536)