myRT

myRT report for GCA_003303215.1_ASM330321v1

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Seq: NRZM01000063.1 Escherichia coli strain A344 NODE_31_length_47306_cov_83.5519, whole genome shotgun sequence (47306 bp)
Overview 1 RT 1: 21400-25283 bp Neighborhood of RT #1 [21400, 25288] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 21400-21858 bp Feature: domain Description: dut Location: 21406-21853 bp Feature: domain Description: dut Location: 21 406-21 853 bp Feature: gene Location: 21965-22561 bp Feature: domain Description: slmA Location: 21971-22547 bp Feature: domain Description: slmA Location: 21 971 -22547 bp Feature: gene Location: 22607-23566 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22742-23291 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22742-23291 bp Feature: gene Location: 23864-24520 bp Feature: domain Description: pyrE Location: 23882-24515 bp Feature: domain Description: pyrE Location: 23882-2451 5 bp Feature: gene Location: 24572-25288 bp Feature: domain Description: rph Location: 24575-25283 bp Feature: domain Description: rph Location: 24575-25283 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: NRZM01000017.1 Escherichia coli strain A344 NODE_47_length_20053_cov_84.051, whole genome shotgun sequence (20053 bp)
Overview 1 RT 1: 1112-3623 bp Neighborhood of RT #1 [1112, 3623] RVT-UG17 SLATT_5 Feature: gene Location: 1112-1249 bp Feature: gene Location: 1265-1399 bp Feature: gene Location: 1507-2877 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1735-2341 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1735-2 341 bp Feature: gene Location: 2855-3406 bp Feature: domain Description: SLATT_5 Location: 2861-3377 bp Feature: domain Description: SLATT_5 Location: 2 861-3377 bp Feature: gene Location: 3444-3623 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)