myRT

myRT report for GCA_003303395.1_ASM330339v1

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Seq: NRZW01000048.1 Escherichia coli strain A178 NODE_34_length_38269_cov_69.1864, whole genome shotgun sequence (38269 bp)
Overview 1 RT 1: 9562-13535 bp Neighborhood of RT #1 [9562, 13546] RVT-UG28 PRK09692 Feature: gene Location: 9562-9798 bp Feature: gene Location: 9986-10264 bp Feature: gene Location: 10467-11966 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 10755-11391 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 1 0755-1 1 391 bp Feature: gene Location: 12090-12260 bp Feature: gene Location: 12326-13546 bp Feature: domain Description: PRK09692 Location: 12338-13535 bp Feature: domain Description: PRK09692 Location: 1 2338-1 3535 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28, PRK09692 (Integrase; provisional)

Seq: NRZW01000098.1 Escherichia coli strain A178 NODE_4_length_287860_cov_78.705, whole genome shotgun sequence (287860 bp)
Overview 1 RT 1: 282734-287002 bp Neighborhood of RT #1 [282734, 287002] XdhC PBP2_CrgA_like_5 RVT-Retrons Feature: gene Location: 282734-283690 bp Feature: domain Description: XdhC Location: 282812-283667 bp Feature: domain Description: XdhC Location: 2 82 812 -2 83667 bp Feature: gene Location: 283669-284079 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 283741-284053 bp Feature: domain Description: PBP2 _CrgA_like_5 Location: 2 83741-2 84053 bp Feature: gene Location: 284939-285871 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 285041-285632 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 85041-2 85632 bp Feature: gene Location: 285858-286826 bp Feature: gene Location: 286859-287002 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XdhC (COG1975), PBP2_CrgA_like_5 (cd08474), RVT-Retrons