myRT

myRT report for GCA_003303565.1_ASM330356v1

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Seq: NSAD01000052.1 Escherichia coli strain A310 NODE_1_length_774673_cov_63.6185, whole genome shotgun sequence (774673 bp)
Overview 1 RT 1: 511818-518605 bp Neighborhood of RT #1 [511818, 519495] Q RVT-Retrons RVT-AbiP2 Phage_GPA Feature: gene Location: 511818-512837 bp Feature: domain Description: Q Location: 511821-512832 bp Feature: domain Description: Q Location: 51 1 821 -51 2832 bp Feature: gene Location: 512880-513587 bp Feature: gene Location: 513584-514774 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 513734-514316 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51 3734-51 431 6 bp Feature: gene Location: 515325-516869 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 515742-516195 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 51 5742-51 61 95 bp Feature: gene Location: 517035-517295 bp Feature: gene Location: 517357-519495 bp Feature: domain Description: Phage_GPA Location: 517618-518605 bp Feature: domain Description: Phage_GPA Location: 51 761 8-51 8605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-Retrons, RVT-AbiP2, Phage_GPA (pfam05840)

Seq: NSAD01000045.1 Escherichia coli strain A310 NODE_34_length_18485_cov_95.2135, whole genome shotgun sequence (18485 bp)
Overview 1 RT 1: 14515-17686 bp Neighborhood of RT #1 [14515, 17688] PRK10276 RVT-GII DDE_Tnp_IS1 Feature: gene Location: 14515-15198 bp Feature: domain Description: PRK10276 Location: 14818-15181 bp Feature: domain Description: PRK102 76 Location: 14818-15181 bp Feature: gene Location: 15252-15854 bp Feature: gene Location: 15829-16839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15835-16447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15835-16447 bp Feature: gene Location: 16962-17174 bp Feature: gene Location: 17185-17688 bp Feature: domain Description: DDE_Tnp_IS1 Location: 17296-17686 bp Feature: domain Description: DDE_Tnp_IS1 Location: 172 96-17686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DDE_Tnp_IS1 (pfam03400)