myRT

myRT report for GCA_003303585.1_ASM330358v1

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Seq: NSAE01000059.1 Escherichia coli strain A76 NODE_31_length_23316_cov_76.976, whole genome shotgun sequence (23316 bp)
Overview 1 RT 1: 9500-13157 bp Neighborhood of RT #1 [9500, 13157] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 9500-9826 bp Feature: domain Description: InsE Location: 9503-9824 bp Feature: domain Description: InsE Location: 9503-9824 bp Feature: gene Location: 9826-10305 bp Feature: domain Description: PHA02517 Location: 9886-10240 bp Feature: domain Description: PHA0251 7 Location: 9886-1 0240 bp Feature: gene Location: 10897-12420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11170-11902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 70-1 1 902 bp Feature: domain Description: GIIM Note: maturase Location: 11977-12175 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 977-1 21 75 bp Feature: gene Location: 12543-12953 bp Feature: domain Description: PHA02517 Location: 12546-12948 bp Feature: domain Description: PHA0251 7 Location: 1 2546-1 2948 bp Feature: gene Location: 12987-13157 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NSAE01000057.1 Escherichia coli strain A76 NODE_3_length_384319_cov_72.223, whole genome shotgun sequence (384319 bp)
Overview 1 RT 1: 221866-231439 bp Neighborhood of RT #1 [221866, 231453] Phage_GPA RVT-AbiP2 RVT-Retrons Q P Feature: gene Location: 221866-224142 bp Feature: domain Description: Phage_GPA Location: 222265-223252 bp Feature: domain Description: Phage_GPA Location: 2 2 2 2 65-2 2 32 52 bp Feature: gene Location: 224204-224464 bp Feature: gene Location: 224630-226174 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 225047-225500 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 2 5047-2 2 5500 bp Feature: gene Location: 226725-227915 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 226875-227457 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 6875-2 2 7457 bp Feature: gene Location: 228662-229681 bp Feature: domain Description: Q Location: 228665-229676 bp Feature: domain Description: Q Location: 2 2 8665-2 2 9676 bp Feature: gene Location: 229681-231453 bp Feature: domain Description: P Location: 229708-231439 bp Feature: domain Description: P Location: 2 2 9708-2 31439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-AbiP2, RVT-Retrons, Q (PHA02536), P (PHA02535)