myRT

myRT report for GCA_003303615.1_ASM330361v1

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Seq: NSAF01000151.1 Escherichia coli strain A19 NODE_41_length_13777_cov_73.2046, whole genome shotgun sequence (13777 bp)
Overview 1 RT 1: 10126-13683 bp Neighborhood of RT #1 [10126, 13683] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 10126-10254 bp Feature: gene Location: 10302-10583 bp Feature: domain Description: PHA02517 Location: 10308-10518 bp Feature: domain Description: PHA0251 7 Location: 1 0308-1 051 8 bp Feature: gene Location: 11175-12698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11448-12180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 448-1 21 80 bp Feature: domain Description: GIIM Note: maturase Location: 12255-12453 bp Feature: domain Description: GIIM Note: maturase Location: 1 2255-1 2453 bp Feature: gene Location: 12815-13261 bp Feature: domain Description: PHA02517 Location: 12818-13259 bp Feature: domain Description: PHA0251 7 Location: 1 281 8-1 3259 bp Feature: gene Location: 13465-13683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NSAF01000075.1 Escherichia coli strain A19 NODE_54_length_5854_cov_64.077, whole genome shotgun sequence (5854 bp)
Overview 1 RT 1: 2-5847 bp Neighborhood of RT #1 [2, 5852] Phage_GPA RVT-AbiP2 RVT-Retrons Q Feature: gene Location: 2-1030 bp Feature: domain Description: Phage_GPA Location: 5-140 bp Feature: domain Description: Phage_GPA Location: 5-140 bp Feature: gene Location: 1134-1352 bp Feature: gene Location: 1518-3062 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1935-2388 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1935-2 388 bp Feature: gene Location: 3405-3545 bp Feature: gene Location: 3619-4803 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3763-4345 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3763-4345 bp Feature: gene Location: 4800-5507 bp Feature: gene Location: 5550-5852 bp Feature: domain Description: Q Location: 5553-5847 bp Feature: domain Description: Q Location: 5553-5847 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-AbiP2, RVT-Retrons, Q (PHA02536)