myRT

myRT report for GCA_003303875.1_ASM330387v1

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Seq: NSBD01000081.1 Escherichia coli strain A215 NODE_16_length_109571_cov_79.7294, whole genome shotgun sequence (109571 bp)
Overview 1 RT 1: 101142-107683 bp Neighborhood of RT #1 [101142, 107683] RVT-UG7 PRK09692 RVT-Retrons Feature: gene Location: 101142-101282 bp Feature: gene Location: 101392-102132 bp Feature: gene Location: 102129-103757 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 102537-102966 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 02537-1 02966 bp Feature: gene Location: 103750-104934 bp Feature: domain Description: PRK09692 Location: 103756-104911 bp Feature: domain Description: PRK09692 Location: 1 03756-1 0491 1 bp Feature: gene Location: 105234-105362 bp Feature: gene Location: 105474-107309 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 105609-106305 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 05609-1 06305 bp Feature: gene Location: 106978-107196 bp Feature: gene Location: 107510-107683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional), RVT-Retrons

Seq: NSBD01000132.1 Escherichia coli strain A215 NODE_45_length_17393_cov_66.4646, whole genome shotgun sequence (17393 bp)
Overview 1 RT 1: 7671-10883 bp Neighborhood of RT #1 [7671, 10948] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 7671-7841 bp Feature: gene Location: 7869-8285 bp Feature: domain Description: PHA02517 Location: 7872-8277 bp Feature: domain Description: PHA02 517 Location: 7872 -82 77 bp Feature: gene Location: 8408-9931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8681-9413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8681-9413 bp Feature: domain Description: GIIM Note: maturase Location: 9488-9686 bp Feature: domain Description: GIIM Note: maturase Location: 9488-9686 bp Feature: gene Location: 9885-10310 bp Feature: gene Location: 10523-10948 bp Feature: domain Description: PHA02517 Location: 10544-10883 bp Feature: domain Description: PHA02 517 Location: 10544-10883 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)