myRT

myRT report for GCA_003303995.1_ASM330399v1

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Seq: BGVF01000003.1 Escherichia coli TUM18674 DNA, sequence003, whole genome shotgun sequence (322602 bp)
Overview 1 RT 1: 49765-53706 bp Neighborhood of RT #1 [49765, 53706] RVT-Retrons Feature: gene Location: 49765-50004 bp Feature: gene Location: 50311-50487 bp Feature: gene Location: 50560-52332 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50719-51337 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5071 9-51 337 bp Feature: gene Location: 52354-52521 bp Feature: gene Location: 52567-53706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: BGVF01000040.1 Escherichia coli TUM18674 DNA, sequence040, whole genome shotgun sequence (13383 bp)
Overview 1 RT 1: 2-6129 bp Neighborhood of RT #1 [2, 6371] AidA YeeP RVT-UG1 GerD Feature: gene Location: 2-391 bp Feature: domain Description: AidA Location: 41-374 bp Feature: domain Description: AidA Location: 41-374 bp Feature: gene Location: 764-1636 bp Feature: domain Description: YeeP Location: 767-1634 bp Feature: domain Description: YeeP Location: 767-1634 bp Feature: gene Location: 2240-4711 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 2852-3362 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 2 852 -3362 bp Feature: gene Location: 4813-5928 bp Feature: gene Location: 5937-6371 bp Feature: domain Description: GerD Location: 6015-6129 bp Feature: domain Description: GerD Location: 6015-612 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AidA (COG3468), YeeP (COG3596), RVT-UG1, GerD (pfam17898)

Seq: BGVF01000054.1 Escherichia coli TUM18674 DNA, sequence054, whole genome shotgun sequence (4325 bp)
Overview 1 RT 1: 1-2299 bp Neighborhood of RT #1 [1, 2299] RVT-GII GIIM PHA02517 Feature: gene Location: 1-1359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109-841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109-841 bp Feature: domain Description: GIIM Note: maturase Location: 916-1114 bp Feature: domain Description: GIIM Note: maturase Location: 916-1114 bp Feature: gene Location: 1536-1835 bp Feature: domain Description: PHA02517 Location: 1539-1833 bp Feature: domain Description: PHA02517 Location: 153 9-183 3 bp Feature: gene Location: 2150-2299 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)