myRT

myRT report for GCA_003304715.1_ASM330471v1

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Seq: BGVL01000018.1 Escherichia coli TUM18680 DNA, sequence018, whole genome shotgun sequence (94273 bp)
Overview 1 RT 1: 47944-51826 bp Neighborhood of RT #1 [47944, 51831] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 47944-48402 bp Feature: domain Description: dut Location: 47950-48397 bp Feature: domain Description: dut Location: 47950-48397 bp Feature: gene Location: 48509-49105 bp Feature: domain Description: slmA Location: 48515-49091 bp Feature: domain Description: slmA Location: 4851 5-49091 bp Feature: gene Location: 49151-50110 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49286-49835 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49286-49835 bp Feature: gene Location: 50408-51064 bp Feature: domain Description: pyrE Location: 50426-51059 bp Feature: domain Description: pyrE Location: 50426-51 059 bp Feature: gene Location: 51115-51831 bp Feature: domain Description: rph Location: 51118-51826 bp Feature: domain Description: rph Location: 51 1 1 8-51 826 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: BGVL01000024.1 Escherichia coli TUM18680 DNA, sequence024, whole genome shotgun sequence (64104 bp)
Overview 1 RT 1: 62492-63972 bp Neighborhood of RT #1 [62492, 64103] RVT-GII GIIM RVT-GII Feature: gene Location: 62492-62662 bp Feature: gene Location: 62800-62979 bp Feature: gene Location: 63078-63599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63084-63366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63084-63366 bp Feature: domain Description: GIIM Note: maturase Location: 63414-63594 bp Feature: domain Description: GIIM Note: maturase Location: 63414-63594 bp Feature: gene Location: 63627-64103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63894-63972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63894-63972 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BGVL01000043.1 Escherichia coli TUM18680 DNA, sequence043, whole genome shotgun sequence (17225 bp)
Overview 1 RT 1: 2-1932 bp Neighborhood of RT #1 [2, 1940] RVT-GII Asparaginase_2 Feature: gene Location: 2-385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245-347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245-3 47 bp Feature: gene Location: 433-582 bp Feature: gene Location: 909-1940 bp Feature: domain Description: Asparaginase_2 Location: 999-1932 bp Feature: domain Description: Asparaginase_2 Location: 999-193 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Asparaginase_2 (pfam01112)