myRT

myRT report for GCA_003304835.1_ASM330483v1

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Seq: NSAX01000136.1 Escherichia coli strain 737 NODE_3_length_284307_cov_111.743, whole genome shotgun sequence (284307 bp)
Overview 1 RT 1: 242253-249840 bp Neighborhood of RT #1 [242253, 249956] PRK09678 RVT-UG8 RVT-UG3 PRK09692 Phage_int_SAM_5 INT_C_like_1 Feature: gene Location: 242253-242525 bp Feature: domain Description: PRK09678 Location: 242262-242436 bp Feature: domain Description: PRK09678 Location: 242262-242436 bp Feature: gene Location: 242545-243357 bp Feature: gene Location: 243957-245957 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 244461-244905 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 244461 -244905 bp Feature: gene Location: 245958-247184 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 246246-246714 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 246246-24671 4 bp Feature: gene Location: 247188-248354 bp Feature: domain Description: PRK09692 Location: 247194-248340 bp Feature: domain Description: PRK09692 Location: 2471 94-248340 bp Feature: gene Location: 248622-249956 bp Feature: domain Description: Phage_int_SAM_5 Location: 248991-249228 bp Feature: domain Description: Phage_int_SAM_5 Location: 248991 -249228 bp Feature: domain Description: INT_C_like_1 Location: 249324-249840 bp Feature: domain Description: INT_C_like_1 Location: 249324-249840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG8, RVT-UG3, PRK09692 (Integrase; provisional), Phage_int_SAM_5 (pfam13102), INT_C_like_1 (cd01184)

Seq: NSAX01000035.1 Escherichia coli strain 737 NODE_42_length_32263_cov_253.668, whole genome shotgun sequence (32263 bp)
Overview 1 RT 1: 29065-32236 bp Neighborhood of RT #1 [29065, 32238] PRK10276 RVT-GII DDE_Tnp_IS1 Feature: gene Location: 29065-29748 bp Feature: domain Description: PRK10276 Location: 29368-29731 bp Feature: domain Description: PRK102 76 Location: 2 9368-2 9731 bp Feature: gene Location: 29802-30404 bp Feature: gene Location: 30379-31389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30385-30997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30385-30997 bp Feature: gene Location: 31512-31724 bp Feature: gene Location: 31735-32238 bp Feature: domain Description: DDE_Tnp_IS1 Location: 31846-32236 bp Feature: domain Description: DDE_Tnp_IS1 Location: 31846-32 2 36 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DDE_Tnp_IS1 (pfam03400)