myRT

myRT report for GCA_003304905.1_ASM330490v1

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Seq: NSAS01000098.1 Escherichia coli strain A209 NODE_20_length_87986_cov_76.8897, whole genome shotgun sequence (87986 bp)
Overview 1 RT 1: 59149-68609 bp Neighborhood of RT #1 [59149, 68836] RVT-UG7 PRK09692 DUF4062 HTH_XRE RVT-Retrons Resolvase Feature: gene Location: 59149-59289 bp Feature: gene Location: 59399-60139 bp Feature: gene Location: 60136-61764 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 60544-60973 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 60544-60973 bp Feature: gene Location: 61757-62941 bp Feature: domain Description: PRK09692 Location: 61763-62918 bp Feature: domain Description: PRK09692 Location: 61 763-6291 8 bp Feature: gene Location: 63650-64831 bp Feature: domain Description: DUF4062 Location: 63665-63992 bp Feature: domain Description: DUF4062 Location: 63665-63992 bp Feature: gene Location: 64862-65323 bp Feature: domain Description: HTH_XRE Location: 64892-65060 bp Feature: domain Description: HTH_XRE Location: 64892-65060 bp Feature: gene Location: 65563-66060 bp Feature: gene Location: 66197-67903 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 66347-66944 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 66347-66944 bp Feature: gene Location: 67940-68122 bp Feature: gene Location: 68171-68836 bp Feature: domain Description: Resolvase Location: 68192-68609 bp Feature: domain Description: Resolvase Location: 681 92-68609 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional), DUF4062 (pfam13271), HTH_XRE (smart00530), RVT-Retrons, Resolvase (smart00857)

Seq: NSAS01000030.1 Escherichia coli strain A209 NODE_51_length_13678_cov_82.3036, whole genome shotgun sequence (13678 bp)
Overview 1 RT 1: 103-3434 bp Neighborhood of RT #1 [103, 3434] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 103-582 bp Feature: domain Description: PHA02517 Location: 163-517 bp Feature: domain Description: PHA02 517 Location: 163-517 bp Feature: gene Location: 1174-2697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1447-2179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1447-2 179 bp Feature: domain Description: GIIM Note: maturase Location: 2254-2452 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 54-2 452 bp Feature: gene Location: 2820-3230 bp Feature: domain Description: PHA02517 Location: 2823-3225 bp Feature: domain Description: PHA02 517 Location: 2 82 3-32 2 5 bp Feature: gene Location: 3264-3434 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NSAS01000162.1 Escherichia coli strain A209 NODE_7_length_231666_cov_79.0188, whole genome shotgun sequence (231666 bp)
Overview 1 RT 1: 12969-17569 bp Neighborhood of RT #1 [12969, 17832] RVT-GII Inovirus_Gp2 DUF3987 Feature: gene Location: 12969-13142 bp Feature: gene Location: 13176-13484 bp Feature: gene Location: 13471-14634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13585-14272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 585-14272 bp Feature: gene Location: 14960-15523 bp Feature: domain Description: Inovirus_Gp2 Location: 15017-15458 bp Feature: domain Description: Inovirus_Gp2 Location: 15017-15458 bp Feature: gene Location: 16381-17832 bp Feature: domain Description: DUF3987 Location: 16492-17569 bp Feature: domain Description: DUF3 987 Location: 16492-17569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Inovirus_Gp2 (pfam11726), DUF3987 (pfam13148)