myRT

myRT report for GCA_003305355.1_ASM330535v1

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Seq: BGWD01000017.1 Escherichia coli TUM18698 DNA, sequence017, whole genome shotgun sequence (147872 bp)
Overview 1 RT 1: 78670-82611 bp Neighborhood of RT #1 [78670, 82611] RVT-Retrons Feature: gene Location: 78670-78909 bp Feature: gene Location: 79216-79392 bp Feature: gene Location: 79465-81237 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 79624-80242 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 79624-80242 bp Feature: gene Location: 81259-81426 bp Feature: gene Location: 81472-82611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: BGWD01000045.1 Escherichia coli TUM18698 DNA, sequence045, whole genome shotgun sequence (13380 bp)
Overview 1 RT 1: 7194-11067 bp Neighborhood of RT #1 [7194, 11438] SLATT_5 RVT-UG17 Caudo_TAP Macro_Appr_pase Feature: gene Location: 7194-7370 bp Feature: gene Location: 7778-8482 bp Feature: domain Description: SLATT_5 Location: 7940-8450 bp Feature: domain Description: SLATT_5 Location: 7940-8450 bp Feature: gene Location: 8460-9830 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 8688-9294 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 8688-92 94 bp Feature: gene Location: 9943-10527 bp Feature: domain Description: Caudo_TAP Location: 10159-10516 bp Feature: domain Description: Caudo_TAP Location: 10159-10516 bp Feature: gene Location: 10536-11438 bp Feature: domain Description: Macro_Appr_pase Location: 10554-11067 bp Feature: domain Description: Macro_Appr_pase Location: 10554-11067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), Macro_Appr_pase (cd02900)

Seq: BGWD01000057.1 Escherichia coli TUM18698 DNA, sequence057, whole genome shotgun sequence (5861 bp)
Overview 1 RT 1: 1767-5858 bp Neighborhood of RT #1 [1767, 5858] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1767-2000 bp Feature: domain Description: DUF905 Location: 1797-1995 bp Feature: domain Description: DUF905 Location: 1797-1995 bp Feature: gene Location: 2068-2520 bp Feature: domain Description: PRK13732 Location: 2074-2518 bp Feature: domain Description: PRK13 73 2 Location: 2074-2518 bp Feature: gene Location: 2715-4616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2982-3813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2982-3 813 bp Feature: domain Description: Intron_maturas2 Location: 3927-4185 bp Feature: domain Description: Intron_maturas2 Location: 3 927-4185 bp Feature: domain Description: HNHc Note: nucleases Location: 4359-4521 bp Feature: domain Description: HNHc Note: nucleases Location: 43 59-4521 bp Feature: gene Location: 5294-5500 bp Feature: gene Location: 5502-5858 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)