myRT

myRT report for GCA_003305375.1_ASM330537v1

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Seq: BGWE01000015.1 Escherichia coli TUM18699 DNA, sequence015, whole genome shotgun sequence (93999 bp)
Overview 1 RT 1: 42443-46325 bp Neighborhood of RT #1 [42443, 46330] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 42443-43159 bp Feature: domain Description: rph Location: 42446-43154 bp Feature: domain Description: rph Location: 42446-431 54 bp Feature: gene Location: 43210-43866 bp Feature: domain Description: pyrE Location: 43228-43861 bp Feature: domain Description: pyrE Location: 43228-43861 bp Feature: gene Location: 44164-45123 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 44299-44848 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 44299-44848 bp Feature: gene Location: 45169-45765 bp Feature: domain Description: slmA Location: 45175-45751 bp Feature: domain Description: slmA Location: 451 75-45751 bp Feature: gene Location: 45872-46330 bp Feature: domain Description: dut Location: 45878-46325 bp Feature: domain Description: dut Location: 45878-46325 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: BGWE01000033.1 Escherichia coli TUM18699 DNA, sequence033, whole genome shotgun sequence (27239 bp)
Overview 1 RT 1: 2-1603 bp Neighborhood of RT #1 [2, 1603] RVT-GII RVT-GII GIIM Feature: gene Location: 2-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 269-347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 69-347 bp Feature: gene Location: 506-1027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 512-794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 512 -794 bp Feature: domain Description: GIIM Note: maturase Location: 842-1022 bp Feature: domain Description: GIIM Note: maturase Location: 842 -102 2 bp Feature: gene Location: 1126-1305 bp Feature: gene Location: 1415-1603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BGWE01000043.1 Escherichia coli TUM18699 DNA, sequence043, whole genome shotgun sequence (17225 bp)
Overview 1 RT 1: 2-1932 bp Neighborhood of RT #1 [2, 1940] RVT-GII Asparaginase_2 Feature: gene Location: 2-385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245-347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245-3 47 bp Feature: gene Location: 433-582 bp Feature: gene Location: 909-1940 bp Feature: domain Description: Asparaginase_2 Location: 999-1932 bp Feature: domain Description: Asparaginase_2 Location: 999-193 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Asparaginase_2 (pfam01112)