myRT

myRT report for GCA_003305455.1_ASM330545v1

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Seq: BGWI01000014.1 Escherichia coli TUM18703 DNA, sequence014, whole genome shotgun sequence (138043 bp)
Overview 1 RT 1: 109406-115437 bp Neighborhood of RT #1 [109406, 115437] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 109406-110326 bp Feature: domain Description: AbiEii Location: 109448-110189 bp Feature: domain Description: AbiEii Location: 1 09448-1 1 01 89 bp Feature: gene Location: 110313-111116 bp Feature: domain Description: AbiEi_3_N Location: 110346-110607 bp Feature: domain Description: AbiEi_3_N Location: 1 1 0346-1 1 0607 bp Feature: domain Description: AbiEi_3 Location: 110619-111075 bp Feature: domain Description: AbiEi_3 Location: 1 1 061 9-1 1 1 075 bp Feature: gene Location: 111411-114620 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 111939-112428 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 1 1 939-1 1 2428 bp Feature: domain Description: nitrilase Location: 113934-114531 bp Feature: domain Description: nitrilase Location: 1 1 3934-1 1 4531 bp Feature: gene Location: 114781-114921 bp Feature: domain Description: Phage_ASH Location: 114808-114901 bp Feature: domain Description: Phage_ASH Location: 1 1 4808-1 1 4901 bp Feature: gene Location: 114967-115437 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: BGWI01000065.1 Escherichia coli TUM18703 DNA, sequence065, whole genome shotgun sequence (10047 bp)
Overview 1 RT 1: 2372-6372 bp Neighborhood of RT #1 [2372, 6380] DcuC RVT-GII Asparaginase_2 Feature: gene Location: 2372-3733 bp Feature: domain Description: DcuC Location: 2375-3707 bp Feature: domain Description: DcuC Location: 2 375-3707 bp Feature: gene Location: 3786-4157 bp Feature: gene Location: 4379-4825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4685-4787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4685-4787 bp Feature: gene Location: 4873-5022 bp Feature: gene Location: 5349-6380 bp Feature: domain Description: Asparaginase_2 Location: 5439-6372 bp Feature: domain Description: Asparaginase_2 Location: 5439-6372 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112)

Seq: BGWI01000098.1 Escherichia coli TUM18703 DNA, sequence098, whole genome shotgun sequence (2212 bp)
Overview 1 RT 1: 9-2197 bp Neighborhood of RT #1 [9, 2197] RVT-GII GIIM Feature: gene Location: 9-1532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282-1014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282-1014 bp Feature: domain Description: GIIM Note: maturase Location: 1089-1287 bp Feature: domain Description: GIIM Note: maturase Location: 1089-1287 bp Feature: gene Location: 1826-2197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)