myRT

myRT report for GCA_003306155.1_ASM330615v1

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Seq: BGXR01000014.1 Escherichia coli TUM18738 DNA, sequence014, whole genome shotgun sequence (109250 bp)
Overview 1 RT 1: 5684-9975 bp Neighborhood of RT #1 [5684, 9975] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 5684-6946 bp Feature: domain Description: YesM Location: 6197-6938 bp Feature: domain Description: YesM Location: 61 97-6938 bp Feature: gene Location: 6976-7146 bp Feature: gene Location: 7496-8017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7502-7784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7502-7784 bp Feature: domain Description: GIIM Note: maturase Location: 7832-8012 bp Feature: domain Description: GIIM Note: maturase Location: 7832-801 2 bp Feature: gene Location: 8045-8584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8375-8453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8375-8453 bp Feature: gene Location: 8615-8812 bp Feature: gene Location: 9070-9975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: BGXR01000023.1 Escherichia coli TUM18738 DNA, sequence023, whole genome shotgun sequence (56977 bp)
Overview 1 RT 1: 27408-35109 bp Neighborhood of RT #1 [27408, 35246] proA RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 27408-28661 bp Feature: domain Description: proA Location: 27435-28626 bp Feature: domain Description: proA Location: 2 7435-2 862 6 bp Feature: gene Location: 29215-29685 bp Feature: gene Location: 30032-33241 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30560-31049 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30560-31049 bp Feature: domain Description: nitrilase Location: 32555-33152 bp Feature: domain Description: nitrilase Location: 32 555-33152 bp Feature: gene Location: 33536-34339 bp Feature: domain Description: AbiEi_3_N Location: 33569-33830 bp Feature: domain Description: AbiEi_3_N Location: 33569-33830 bp Feature: domain Description: AbiEi_3 Location: 33842-34298 bp Feature: domain Description: AbiEi_3 Location: 33842 -342 98 bp Feature: gene Location: 34326-35246 bp Feature: domain Description: AbiEii Location: 34368-35109 bp Feature: domain Description: AbiEii Location: 34368-35109 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: BGXR01000067.1 Escherichia coli TUM18738 DNA, sequence067, whole genome shotgun sequence (12612 bp)
Overview 1 RT 1: 11528-12449 bp Neighborhood of RT #1 [11528, 12610] PRK10173 PRK10173 RVT-GII Feature: gene Location: 11528-11977 bp Feature: domain Description: PRK10173 Location: 11531-11969 bp Feature: domain Description: PRK10173 Location: 1153 1-11969 bp Feature: gene Location: 11961-12272 bp Feature: domain Description: PRK10173 Location: 11964-12183 bp Feature: domain Description: PRK10173 Location: 11964-12183 bp Feature: gene Location: 12311-12610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12380-12449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123 80-12449 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII

Seq: BGXR01000109.1 Escherichia coli TUM18738 DNA, sequence109, whole genome shotgun sequence (2849 bp)
Overview 1 RT 1: 622-2602 bp Neighborhood of RT #1 [622, 2847] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 622-1026 bp Feature: domain Description: InsE Location: 652-988 bp Feature: domain Description: InsE Location: 652-988 bp Feature: gene Location: 1055-1411 bp Feature: domain Description: PHA02517 Location: 1058-1367 bp Feature: domain Description: PHA02517 Location: 1058-1367 bp Feature: gene Location: 1528-2847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1597-2329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1597-2329 bp Feature: domain Description: GIIM Note: maturase Location: 2404-2602 bp Feature: domain Description: GIIM Note: maturase Location: 24 04 -2602 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: BGXR01000122.1 Escherichia coli TUM18738 DNA, sequence122, whole genome shotgun sequence (1557 bp)
Overview 1 RT 1: 158-1556 bp Neighborhood of RT #1 [158, 1555] PHA02517 RVT-GII Feature: gene Location: 158-637 bp Feature: domain Description: PHA02517 Location: 218-572 bp Feature: domain Description: PHA025 17 Location: 218-5 72 bp Feature: gene Location: 1229-1555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1502-1556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 02-15 5 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII