myRT

myRT report for GCA_003306235.1_ASM330623v1

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Seq: BGXV01000003.1 Escherichia coli TUM18742 DNA, sequence0003, whole genome shotgun sequence (392916 bp)
Overview 1 RT 1: 6748-11134 bp Neighborhood of RT #1 [6748, 11134] RVT-Retrons Feature: gene Location: 6748-7887 bp Feature: gene Location: 7933-8100 bp Feature: gene Location: 8122-9894 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8281-8899 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8281 -8899 bp Feature: gene Location: 10450-10689 bp Feature: gene Location: 10904-11134 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: BGXV01000047.1 Escherichia coli TUM18742 DNA, sequence0047, whole genome shotgun sequence (10483 bp)
Overview 1 RT 1: 622-4057 bp Neighborhood of RT #1 [622, 4122] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 622-1026 bp Feature: domain Description: InsE Location: 652-988 bp Feature: domain Description: InsE Location: 652 -988 bp Feature: gene Location: 1055-1411 bp Feature: domain Description: PHA02517 Location: 1058-1367 bp Feature: domain Description: PHA02 517 Location: 1058-1367 bp Feature: gene Location: 1528-3051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1801-2533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1801-2 533 bp Feature: domain Description: GIIM Note: maturase Location: 2608-2806 bp Feature: domain Description: GIIM Note: maturase Location: 2 608-2 806 bp Feature: gene Location: 3005-3430 bp Feature: gene Location: 3643-4122 bp Feature: domain Description: PHA02517 Location: 3703-4057 bp Feature: domain Description: PHA02 517 Location: 3703-4057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: BGXV01002476.1 Escherichia coli TUM18742 DNA, sequence2476, whole genome shotgun sequence (563 bp)
Overview 1 RT 1: 2-527 bp Neighborhood of RT #1 [2, 562] RVT-UG4 Feature: gene Location: 2-562 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 65-527 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 65-527 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4