myRT

myRT report for GCA_003306255.1_ASM330625v1

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Seq: BGXW01000002.1 Escherichia coli TUM18743 DNA, sequence002, whole genome shotgun sequence (479175 bp)
Overview 1 RT 1: 301978-306261 bp Neighborhood of RT #1 [301978, 306269] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 301978-302883 bp Feature: gene Location: 303021-303212 bp Feature: gene Location: 303369-303908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303699-303777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303699-303777 bp Feature: gene Location: 303936-304457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303942-304224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303942-304224 bp Feature: domain Description: GIIM Note: maturase Location: 304272-304452 bp Feature: domain Description: GIIM Note: maturase Location: 304272-304452 bp Feature: gene Location: 304779-304967 bp Feature: gene Location: 305007-306269 bp Feature: domain Description: YesM Location: 305520-306261 bp Feature: domain Description: YesM Location: 305520-306261 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: BGXW01000013.1 Escherichia coli TUM18743 DNA, sequence013, whole genome shotgun sequence (129059 bp)
Overview 1 RT 1: 100422-106453 bp Neighborhood of RT #1 [100422, 106453] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 100422-101342 bp Feature: domain Description: AbiEii Location: 100464-101205 bp Feature: domain Description: AbiEii Location: 100464-1012 05 bp Feature: gene Location: 101329-102132 bp Feature: domain Description: AbiEi_3_N Location: 101362-101623 bp Feature: domain Description: AbiEi_3_N Location: 101362 -10162 3 bp Feature: domain Description: AbiEi_3 Location: 101635-102091 bp Feature: domain Description: AbiEi_3 Location: 101635-102 091 bp Feature: gene Location: 102427-105636 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 102955-103444 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 102 955-103444 bp Feature: domain Description: nitrilase Location: 104950-105547 bp Feature: domain Description: nitrilase Location: 104950-105547 bp Feature: gene Location: 105797-105937 bp Feature: domain Description: Phage_ASH Location: 105824-105917 bp Feature: domain Description: Phage_ASH Location: 10582 4-105917 bp Feature: gene Location: 105983-106453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: BGXW01000072.1 Escherichia coli TUM18743 DNA, sequence072, whole genome shotgun sequence (11765 bp)
Overview 1 RT 1: 3-1077 bp Neighborhood of RT #1 [3, 1085] RVT-GII PRK10173 PRK10173 Feature: gene Location: 3-302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-141 bp Feature: gene Location: 341-652 bp Feature: domain Description: PRK10173 Location: 344-563 bp Feature: domain Description: PRK10173 Location: 3 44-563 bp Feature: gene Location: 636-1085 bp Feature: domain Description: PRK10173 Location: 639-1077 bp Feature: domain Description: PRK10173 Location: 63 9-1077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: BGXW01000083.1 Escherichia coli TUM18743 DNA, sequence083, whole genome shotgun sequence (4275 bp)
Overview 1 RT 1: 3-2262 bp Neighborhood of RT #1 [3, 2262] RVT-GII GIIM PHA02517 Feature: gene Location: 3-1322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72-804 bp Feature: domain Description: GIIM Note: maturase Location: 879-1077 bp Feature: domain Description: GIIM Note: maturase Location: 879-1077 bp Feature: gene Location: 1499-1798 bp Feature: domain Description: PHA02517 Location: 1502-1796 bp Feature: domain Description: PHA02517 Location: 1502-1796 bp Feature: gene Location: 2113-2262 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: BGXW01000113.1 Escherichia coli TUM18743 DNA, sequence113, whole genome shotgun sequence (919 bp)
Overview 1 RT 1: 3-916 bp Neighborhood of RT #1 [3, 916] RVT-GII Feature: gene Location: 3-329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: gene Location: 623-916 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII