myRT

myRT report for GCA_003306655.1_ASM330665v1

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Seq: BGYQ01000012.1 Escherichia coli TUM18763 DNA, sequence012, whole genome shotgun sequence (181048 bp)
Overview 1 RT 1: 78670-82611 bp Neighborhood of RT #1 [78670, 82611] RVT-Retrons Feature: gene Location: 78670-78909 bp Feature: gene Location: 79216-79392 bp Feature: gene Location: 79465-81237 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 79624-80242 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 79624-80242 bp Feature: gene Location: 81259-81426 bp Feature: gene Location: 81472-82611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: BGYQ01000035.1 Escherichia coli TUM18763 DNA, sequence035, whole genome shotgun sequence (22912 bp)
Overview 1 RT 1: 8376-12426 bp Neighborhood of RT #1 [8376, 12479] InsE PHA02517 RVT-GII GIIM PHA02517 autotrans_barl Feature: gene Location: 8376-8702 bp Feature: domain Description: InsE Location: 8379-8700 bp Feature: domain Description: InsE Location: 8379-8700 bp Feature: gene Location: 8702-9181 bp Feature: domain Description: PHA02517 Location: 8762-9116 bp Feature: domain Description: PHA02 517 Location: 8762 -9116 bp Feature: gene Location: 9773-11296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10046-10778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10046-10778 bp Feature: domain Description: GIIM Note: maturase Location: 10853-11051 bp Feature: domain Description: GIIM Note: maturase Location: 10853-11051 bp Feature: gene Location: 11413-11859 bp Feature: domain Description: PHA02517 Location: 11416-11857 bp Feature: domain Description: PHA02 517 Location: 11416-11857 bp Feature: gene Location: 11862-12479 bp Feature: domain Description: autotrans_barl Location: 11985-12426 bp Feature: domain Description: autotrans_barl Location: 11985-12 42 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), autotrans_barl (TIGR01414)

Seq: BGYQ01000046.1 Escherichia coli TUM18763 DNA, sequence046, whole genome shotgun sequence (13380 bp)
Overview 1 RT 1: 7194-11067 bp Neighborhood of RT #1 [7194, 11438] SLATT_5 RVT-UG17 Caudo_TAP Macro_Appr_pase Feature: gene Location: 7194-7370 bp Feature: gene Location: 7778-8482 bp Feature: domain Description: SLATT_5 Location: 7940-8450 bp Feature: domain Description: SLATT_5 Location: 7940-8450 bp Feature: gene Location: 8460-9830 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 8688-9294 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 8688-9294 bp Feature: gene Location: 9943-10527 bp Feature: domain Description: Caudo_TAP Location: 10159-10516 bp Feature: domain Description: Caudo_TAP Location: 10159-10516 bp Feature: gene Location: 10536-11438 bp Feature: domain Description: Macro_Appr_pase Location: 10554-11067 bp Feature: domain Description: Macro_Appr_pase Location: 10554-11067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), Macro_Appr_pase (cd02900)

Seq: BGYQ01000080.1 Escherichia coli TUM18763 DNA, sequence080, whole genome shotgun sequence (2663 bp)
Overview 1 RT 1: 149-1955 bp Neighborhood of RT #1 [149, 2050] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 149-2050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 16-124 7 bp Feature: domain Description: Intron_maturas2 Location: 1361-1619 bp Feature: domain Description: Intron_maturas2 Location: 1361-1619 bp Feature: domain Description: HNHc Note: nucleases Location: 1793-1955 bp Feature: domain Description: HNHc Note: nucleases Location: 1793-1955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)